KEGG   PATHWAY: abac00030
Entry
abac00030                   Pathway                                
Name
Pentose phosphate pathway - Luteitalea pratensis
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
abac00030  Pentose phosphate pathway
abac00030

Module
abac_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:abac00030]
abac_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:abac00030]
abac_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:abac00030]
abac_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:abac00030]
Other DBs
GO: 0006098
Organism
Luteitalea pratensis [GN:abac]
Gene
LuPra_02955  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LuPra_02956  zwf; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
LuPra_02957  pgl_3; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
LuPra_02034  pgl_1; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
LuPra_02171  pgl_2; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
LuPra_00224  gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
LuPra_03749  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
LuPra_05589  tktB; Transketolase 2 [KO:K00615] [EC:2.2.1.1]
LuPra_04978  tal_1; Transaldolase [KO:K00616] [EC:2.2.1.2]
LuPra_05472  tal_2; Transaldolase [KO:K00616] [EC:2.2.1.2]
LuPra_03256  rpiB; Ribose-5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
LuPra_05863  ywlF; Putative sugar phosphate isomerase YwlF [KO:K01808] [EC:5.3.1.6]
LuPra_03104  hxlA; 3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
LuPra_03257  deoC2; Deoxyribose-phosphate aldolase 2 [KO:K01619] [EC:4.1.2.4]
LuPra_01065  rbsK; Ribokinase [KO:K00852] [EC:2.7.1.15]
LuPra_04432  deoB; Phosphopentomutase [KO:K01839] [EC:5.4.2.7]
LuPra_04920  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
LuPra_02905  kdgA; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LuPra_04555  gno_6; Gluconate 5-dehydrogenase [KO:K00034] [EC:1.1.1.47]
LuPra_05149  tdh_3; L-threonine 3-dehydrogenase [KO:K22969] [EC:1.1.1.47]
LuPra_00945  gcd_1; Quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
LuPra_04371  gcd_3; Quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
LuPra_01478  gcd_2; Quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
LuPra_01782  gnl; Gluconolactonase precursor [KO:K01053] [EC:3.1.1.17]
LuPra_00225  aminoimidazole riboside kinase [KO:K00874] [EC:2.7.1.45]
LuPra_02906  kdgK; 2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
LuPra_04253  ttuD; Putative hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
LuPra_01339  putative pyridoxal phosphate-dependent enzyme [KO:K17468] [EC:4.3.1.29]
LuPra_02021  selenocysteine synthase [KO:K17468] [EC:4.3.1.29]
LuPra_02024  selenocysteine synthase [KO:K17468] [EC:4.3.1.29]
LuPra_06012  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
LuPra_03988  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K00850] [EC:2.7.1.11]
LuPra_04193  pfkA1; 6-phosphofructokinase 1 [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
abac00010  Glycolysis / Gluconeogenesis
abac00040  Pentose and glucuronate interconversions
abac00052  Galactose metabolism
abac00230  Purine metabolism
abac00240  Pyrimidine metabolism
abac00340  Histidine metabolism
abac00630  Glyoxylate and dicarboxylate metabolism
abac00750  Vitamin B6 metabolism
KO pathway
ko00030   
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