KEGG   PATHWAY: adi00630
Entry
adi00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Alloalcanivorax dieselolei
Class
Metabolism; Carbohydrate metabolism
Pathway map
adi00630  Glyoxylate and dicarboxylate metabolism
adi00630

Module
adi_M00012  Glyoxylate cycle [PATH:adi00630]
adi_M00621  Glycine cleavage system [PATH:adi00630]
Other DBs
GO: 0046487 0043648
Organism
Alloalcanivorax dieselolei [GN:adi]
Gene
B5T_03382  aceA; Isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
B5T_00529  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
B5T_03848  acsA; Acetyl-coenzyme A synthetase 2 [KO:K01895] [EC:6.2.1.1]
B5T_01960  glcB; Malate synthase G [KO:K01638] [EC:2.3.3.9]
B5T_02434  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B5T_02688  gltA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
B5T_01681  Citrate synthase [KO:K01647] [EC:2.3.3.1]
B5T_03090  DNA binding domain protein, excisionase family [KO:K01647] [EC:2.3.3.1]
B5T_01500  Citrate synthase [KO:K01647] [EC:2.3.3.1]
B5T_02361  prpC; 2-methylcitrate synthase/citrate synthase II subfamily [KO:K01659] [EC:2.3.3.5]
B5T_03302  acnA2; Aconitate hydratase 1 [KO:K27802] [EC:4.2.1.3 4.2.1.99]
B5T_02397  acnB; Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
B5T_04210  Putative acetyl-CoA acetyltransferase with thiolase domain [KO:K00626] [EC:2.3.1.9]
B5T_02068  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B5T_01459  Acetyl-CoA C-acyltransferase FadI [KO:K00626] [EC:2.3.1.9]
B5T_03372  fadAx; Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B5T_00675  Thiolase protein [KO:K00626] [EC:2.3.1.9]
B5T_00698  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B5T_01614  3-ketoacyl-CoA thiolase B, peroxisomal [KO:K00626] [EC:2.3.1.9]
B5T_03038  atoB; Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B5T_02906  fadA; Acetyl CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B5T_04117  Acetoacetyl-CoA reductase protein [KO:K00023] [EC:1.1.1.36]
B5T_04119  MaoC-like dehydratase [KO:K17865] [EC:4.2.1.55]
B5T_04271  Catalase [KO:K03781] [EC:1.11.1.6]
B5T_04165  hprA; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, putative [KO:K00018] [EC:1.1.1.29]
B5T_02738  Haloacid dehalogenase-like hydrolase, putative [KO:K01091] [EC:3.1.3.18]
B5T_00621  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
B5T_00815  glyA; Serine hydroxymethyltransferase 3 [KO:K00600] [EC:2.1.2.1]
B5T_00298  gcvP-2; putative glycine dehydrogenase [decarboxylating] subunit 1 [KO:K00282] [EC:1.4.4.2]
B5T_00299  gcvP-1; putative glycine dehydrogenase [decarboxylating] subunit 2 [KO:K00283] [EC:1.4.4.2]
B5T_00296  gcvT; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
B5T_02681  lpdG; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B5T_00297  gcvH; Glycine cleavage system H protein [KO:K02437]
B5T_02614  hyi; Hydroxypyruvate isomerase Gcxl [KO:K01816] [EC:5.3.1.22]
B5T_04213  Hydroxypyruvate reductase, putative [KO:K11529] [EC:2.7.1.165]
B5T_03669  tdh; Dehydrogenase, isocitrate/isopropylmalate family [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
B5T_02939  Formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
B5T_02940  fdsA; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
B5T_02941  fdsB; NADH dehydrogenase (Quinone) [KO:K00124]
B5T_02942  fdsG; Formate dehydrogenase subunit gamma [KO:K00127]
B5T_02830  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
B5T_01055  fmdA; Acetamidase/Formamidase family [KO:K01455] [EC:3.5.1.49]
B5T_00747  amiF; Formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
adi00010  Glycolysis / Gluconeogenesis
adi00020  Citrate cycle (TCA cycle)
adi00030  Pentose phosphate pathway
adi00053  Ascorbate and aldarate metabolism
adi00071  Fatty acid degradation
adi00230  Purine metabolism
adi00250  Alanine, aspartate and glutamate metabolism
adi00260  Glycine, serine and threonine metabolism
adi00620  Pyruvate metabolism
adi00710  Carbon fixation by Calvin cycle
adi00750  Vitamin B6 metabolism
adi00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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