KEGG   PATHWAY: aluc00020
Entry
aluc00020                   Pathway                                
Name
Citrate cycle (TCA cycle) - Aspergillus luchuensis
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
aluc00020  Citrate cycle (TCA cycle)
aluc00020

Module
aluc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:aluc00020]
aluc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:aluc00020]
aluc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:aluc00020]
aluc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:aluc00020]
aluc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:aluc00020]
Other DBs
GO: 0006099
Organism
Aspergillus luchuensis [GN:aluc]
Gene
AKAW2_40401S  uncharacterized protein [KO:K01647] [EC:2.3.3.1]
AKAW2_40664A  CIT1; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
AKAW2_52041S  uncharacterized protein [KO:K01647] [EC:2.3.3.1]
AKAW2_60503A  uncharacterized protein [KO:K01647] [EC:2.3.3.1]
AKAW2_21034S  uncharacterized protein [KO:K01647] [EC:2.3.3.1]
AKAW2_80054A  ACL1; citrate synthase [KO:K01648] [EC:2.3.3.8]
AKAW2_80055S  ACL2; glutathione synthetase ATP-binding domain-like protein [KO:K01648] [EC:2.3.3.8]
AKAW2_51847A  ACO1_2; aconitate hydratase mitochondrial [KO:K01681] [EC:4.2.1.3]
AKAW2_70480A  uncharacterized protein [KO:K01681] [EC:4.2.1.3]
AKAW2_11036S  IDP1; isocitrate dehydrogenase [NADP], mitochondrial precursor (oxalosuccinate decarboxylase) [KO:K00031] [EC:1.1.1.42]
AKAW2_30972S  IDH1; isocitrate dehydrogenase (NAD(+)) idh1 [KO:K00030] [EC:1.1.1.41]
AKAW2_30510A  IDH2; NAD-dependent isocitrate dehydrogenase [KO:K00030] [EC:1.1.1.41]
AKAW2_51464S  KGD1_1; 2-oxoglutarate dehydrogenase E1 component [KO:K00164] [EC:1.2.4.2]
AKAW2_52001S  KGD2_2; 2-oxoglutarate dehydrogenase complex E2 component [KO:K00658] [EC:2.3.1.61]
AKAW2_80968A  KGD2_1; 2-oxoglutarate dehydrogenase complex E2 component [KO:K00658] [EC:2.3.1.61]
AKAW2_11561S  LPD1; dihydrolipoamide dehydrogenase precursor [KO:K00382] [EC:1.8.1.4]
AKAW2_30715A  uncharacterized protein [KO:K01899] [EC:6.2.1.4 6.2.1.5]
AKAW2_70823A  TCA8; succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
AKAW2_40719S  TCA9; succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
AKAW2_10629S  SDH1_1; succinate dehydrogenase flavoprotein subunit [KO:K00234] [EC:1.3.5.1]
AKAW2_11058S  SDH1_3; succinate dehydrogenase flavoprotein subunit [KO:K00234] [EC:1.3.5.1]
AKAW2_41099S  SDH2; succinate dehydrogenase complex, subunit B [KO:K00235] [EC:1.3.5.1]
AKAW2_11854A  uncharacterized protein [KO:K00236]
AKAW2_10247A  SDH4; membrane anchor subunit of succinate dehydrogenase, Sdh4 [KO:K00237]
AKAW2_61148A  FUM1; fumarase fum1 [KO:K01679] [EC:4.2.1.2]
AKAW2_60679S  uncharacterized protein [KO:K00026] [EC:1.1.1.37]
AKAW2_80643A  uncharacterized protein [KO:K00026] [EC:1.1.1.37]
AKAW2_11939S  MDH1; malate dehydrogenase, cytoplasmic [KO:K00026] [EC:1.1.1.37]
AKAW2_51240S  uncharacterized protein [KO:K01958] [EC:6.4.1.1]
AKAW2_80226A  PCK1; protein kinase C-like 1 [KO:K01610] [EC:4.1.1.49]
AKAW2_80416S  uncharacterized protein [KO:K00161] [EC:1.2.4.1]
AKAW2_11341A  PDA1; alpha subunit of pyruvate dehydrogenase [KO:K00161] [EC:1.2.4.1]
AKAW2_20207A  PDB1; pyruvate dehydrogenase E1, beta subunit [KO:K00162] [EC:1.2.4.1]
AKAW2_11936S  LAT1; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase component (E2) [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
aluc00010  Glycolysis / Gluconeogenesis
aluc00053  Ascorbate and aldarate metabolism
aluc00061  Fatty acid biosynthesis
aluc00062  Fatty acid elongation
aluc00071  Fatty acid degradation
aluc00190  Oxidative phosphorylation
aluc00220  Arginine biosynthesis
aluc00250  Alanine, aspartate and glutamate metabolism
aluc00280  Valine, leucine and isoleucine degradation
aluc00350  Tyrosine metabolism
aluc00470  D-Amino acid metabolism
aluc00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

DBGET integrated database retrieval system