KEGG   PATHWAY: aqs00630
Entry
aqs00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Aquitalea sp. USM4
Class
Metabolism; Carbohydrate metabolism
Pathway map
aqs00630  Glyoxylate and dicarboxylate metabolism
aqs00630

Module
aqs_M00012  Glyoxylate cycle [PATH:aqs00630]
aqs_M00621  Glycine cleavage system [PATH:aqs00630]
Other DBs
GO: 0046487 0043648
Organism
Aquitalea sp. USM4 [GN:aqs]
Gene
DKK66_11925  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
DKK66_01865  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DKK66_11905  malate synthase A [KO:K01638] [EC:2.3.3.9]
DKK66_03130  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
DKK66_03095  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
DKK66_18310  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
DKK66_13935  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
DKK66_00305  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
DKK66_14275  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
DKK66_18165  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
DKK66_04330  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
DKK66_17575  catalase [KO:K03781] [EC:1.11.1.6]
DKK66_03685  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
DKK66_04240  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
DKK66_01550  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
DKK66_19505  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
DKK66_11675  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
DKK66_19580  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DKK66_06290  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DKK66_11080  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DKK66_17510  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DKK66_02700  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
DKK66_12695  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
DKK66_12680  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
DKK66_03075  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DKK66_08560  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DKK66_12685  gcvH; glycine cleavage system protein GcvH [KO:K02437]
DKK66_11795  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
DKK66_11800  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
DKK66_19350  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
DKK66_04710  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
DKK66_02570  glycerate kinase [KO:K00865] [EC:2.7.1.165]
DKK66_01655  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
DKK66_00480  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
DKK66_00940  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
DKK66_06725  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
DKK66_10890  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
DKK66_03730  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
DKK66_10885  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
DKK66_03725  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
DKK66_03735  fdxH; formate dehydrogenase subunit beta [KO:K00124]
DKK66_10880  formate dehydrogenase [KO:K00124]
DKK66_03740  formate dehydrogenase subunit gamma [KO:K00127]
DKK66_10875  formate dehydrogenase subunit gamma [KO:K00127]
DKK66_07185  esterase [KO:K01432] [EC:3.5.1.9]
DKK66_13610  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
DKK66_10755  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aqs00010  Glycolysis / Gluconeogenesis
aqs00020  Citrate cycle (TCA cycle)
aqs00030  Pentose phosphate pathway
aqs00053  Ascorbate and aldarate metabolism
aqs00071  Fatty acid degradation
aqs00230  Purine metabolism
aqs00250  Alanine, aspartate and glutamate metabolism
aqs00260  Glycine, serine and threonine metabolism
aqs00620  Pyruvate metabolism
aqs00710  Carbon fixation by Calvin cycle
aqs00750  Vitamin B6 metabolism
aqs00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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