KEGG   PATHWAY: asub00630
Entry
asub00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Atlantibacter subterranea
Class
Metabolism; Carbohydrate metabolism
Pathway map
asub00630  Glyoxylate and dicarboxylate metabolism
asub00630

Module
asub_M00012  Glyoxylate cycle [PATH:asub00630]
asub_M00621  Glycine cleavage system [PATH:asub00630]
Other DBs
GO: 0046487 0043648
Organism
Atlantibacter subterranea [GN:asub]
Gene
NLZ15_20785  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
NLZ15_20480  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NLZ15_20790  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
NLZ15_02275  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NLZ15_07160  citrate synthase [KO:K01647] [EC:2.3.3.1]
NLZ15_09705  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
NLZ15_18215  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
NLZ15_03940  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
NLZ15_18370  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
NLZ15_15135  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
NLZ15_12185  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
NLZ15_15245  katA; catalase KatA [KO:K03781] [EC:1.11.1.6]
NLZ15_08605  ghrA; glyoxylate/hydroxypyruvate reductase GhrA [KO:K12972] [EC:1.1.1.79 1.1.1.81]
NLZ15_00605  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
NLZ15_05135  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
NLZ15_01625  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
NLZ15_22035  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NLZ15_16350  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NLZ15_03710  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
NLZ15_03700  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
NLZ15_18235  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NLZ15_03705  gcvH; glycine cleavage system protein GcvH [KO:K02437]
NLZ15_19365  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
NLZ15_09220  NAD(P)-binding domain-containing protein [KO:K00042] [EC:1.1.1.60]
NLZ15_04205  glycerate kinase [KO:K00865] [EC:2.7.1.165]
NLZ15_19360  garK; glycerate 2-kinase [KO:K00865] [EC:2.7.1.165]
NLZ15_10565  glycerate kinase [KO:K11529] [EC:2.7.1.165]
NLZ15_04830  fucO; lactaldehyde reductase [KO:K00048] [EC:1.1.1.77]
NLZ15_06145  fucO; lactaldehyde reductase [KO:K00048] [EC:1.1.1.77]
NLZ15_16930  ttdA; L(+)-tartrate dehydratase subunit alpha [KO:K03779] [EC:4.2.1.32]
NLZ15_16925  ttdB; L(+)-tartrate dehydratase subunit beta [KO:K03780] [EC:4.2.1.32]
NLZ15_10560  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
NLZ15_12960  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NLZ15_21950  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NLZ15_00290  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
NLZ15_00285  fdxH; formate dehydrogenase subunit beta [KO:K00124]
NLZ15_00280  fdoI; formate dehydrogenase cytochrome b556 subunit [KO:K00127]
NLZ15_09485  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NLZ15_15935  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
NLZ15_15940  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
NLZ15_15950  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
asub00010  Glycolysis / Gluconeogenesis
asub00020  Citrate cycle (TCA cycle)
asub00030  Pentose phosphate pathway
asub00053  Ascorbate and aldarate metabolism
asub00071  Fatty acid degradation
asub00230  Purine metabolism
asub00250  Alanine, aspartate and glutamate metabolism
asub00260  Glycine, serine and threonine metabolism
asub00620  Pyruvate metabolism
asub00710  Carbon fixation by Calvin cycle
asub00750  Vitamin B6 metabolism
asub00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system