KEGG   PATHWAY: atr00710
Entry
atr00710                    Pathway                                
Name
Carbon fixation by Calvin cycle - Amborella trichopoda
Class
Metabolism; Energy metabolism
Pathway map
atr00710  Carbon fixation by Calvin cycle
atr00710

Module
atr_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:atr00710]
atr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:atr00710]
atr_M00169  CAM (Crassulacean acid metabolism), light [PATH:atr00710]
atr_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:atr00710]
atr_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:atr00710]
atr_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:atr00710]
Organism
Amborella trichopoda [GN:atr]
Gene
2546579  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
18432099  ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic [KO:K01602] [EC:4.1.1.39]
18446483  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
18448095  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
18426468  uncharacterized protein LOC18426468 isoform X1 [KO:K00927] [EC:2.7.2.3]
18448088  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
18443315  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [KO:K00134] [EC:1.2.1.12]
18444197  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
18438472  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
18434583  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
18445484  LOW QUALITY PROTEIN: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
18424214  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
18441399  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
18447524  fructose-bisphosphate aldolase 5, cytosolic [KO:K01623] [EC:4.1.2.13]
18436715  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
18442644  uncharacterized protein LOC18442644 [KO:K03841] [EC:3.1.3.11]
18444303  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
18437775  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
18423165  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
18434690  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
18422789  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
18422128  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
18429622  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
18428113  probable ribose-5-phosphate isomerase 1 [KO:K01807] [EC:5.3.1.6]
18443034  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
18427310  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
18443858  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
18441770  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
18436113  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
105420521  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
18431902  ribulose-phosphate 3-epimerase, chloroplastic isoform X1 [KO:K01783] [EC:5.1.3.1]
18438186  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
18430750  uncharacterized protein LOC18430750 isoform X2 [KO:K00616] [EC:2.2.1.2]
18434316  uncharacterized protein LOC18434316 [KO:K00616] [EC:2.2.1.2]
18442136  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
18439544  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
18426621  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
18437478  LOW QUALITY PROTEIN: phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
18423966  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
18430615  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
18440667  pyruvate, phosphate dikinase 2 isoform X1 [KO:K01006] [EC:2.7.9.1]
18443418  NADP-dependent malic enzyme isoform X1 [KO:K00029] [EC:1.1.1.40]
18432968  malate dehydrogenase [NADP] 1, chloroplastic [KO:K00051] [EC:1.1.1.82]
18426336  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
18428843  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
105420834  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
18422244  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
18440828  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
18442455  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
18442196  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
18423085  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
18429109  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
atr00010  Glycolysis / Gluconeogenesis
atr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
atr00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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