KEGG   PATHWAY: bama00010
Entry
bama00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Bacillus velezensis UCMB5033
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bama00010  Glycolysis / Gluconeogenesis
bama00010

Module
bama_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bama00010]
bama_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bama00010]
bama_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bama00010]
bama_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bama00010]
Other DBs
GO: 0006096 0006094
Organism
Bacillus velezensis UCMB5033 [GN:bama]
Gene
RBAU_2452  glcK; glucose kinase [KO:K25026] [EC:2.7.1.2]
RBAU_2970  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
RBAU_2763  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
RBAU_3561  ywjI; putative fructose 1,6-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
RBAU_3828  fbp; fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
RBAU_3564  fbaA; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
RBAU_3263  tpiA; triose phosphate isomerase [KO:K01803] [EC:5.3.1.1]
RBAU_3265  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RBAU_2743  gapB; glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
RBAU_3264  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
RBAU_3262  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase/phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
RBAU_3261  eno; enolase [KO:K01689] [EC:4.2.1.11]
RBAU_2762  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RBAU_1424  pdhA; pyruvate dehydrogenase (E1 alpha subunit) [KO:K00161] [EC:1.2.4.1]
RBAU_1425  pdhB; pyruvate dehydrogenase (E1 beta subunit) [KO:K00162] [EC:1.2.4.1]
RBAU_0807  acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [KO:K00627] [EC:2.3.1.12]
RBAU_1426  pdhC; pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) [KO:K00627] [EC:2.3.1.12]
RBAU_0808  acoL; Dihydrolipoamide dehydrogenase (acetoin dehydrogenase E3 component) [KO:K00382] [EC:1.8.1.4]
RBAU_2370  lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) [KO:K00382] [EC:1.8.1.4]
RBAU_1427  pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
RBAU_0301  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
RBAU_0330  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RBAU_0548  adhB; putative oxidoreductase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RBAU_1718  adh; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
RBAU_0536  adhA; putative dehydrogenase [KO:K13979] [EC:1.1.1.2]
RBAU_1875  dhaS; putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RBAU_2800  ywdH; putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RBAU_3817  aldX; putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RBAU_2817  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
RBAU_2788  ytcI; putative acyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
RBAU_1821  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
RBAU_0920  pgcA; alpha-phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
RBAU_2893  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
RBAU_3704  licH; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
RBAU_3719  gmuD; mannoside-phospho-beta-d-glucosidase [KO:K01223] [EC:3.2.1.86]
RBAU_0333  bglC; aryl-phospho-beta-d-glucosidase [KO:K01223] [EC:3.2.1.86]
RBAU_1906  bglA; aryl-6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
RBAU_3768  bglH; aryl-phospho-beta-d-glucosidase [KO:K01223] [EC:3.2.1.86]
RBAU_2177  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
RBAU_1349  ptsG; phosphotransferase system (PTS) glucose-specific enzyme IICBA component [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bama00020  Citrate cycle (TCA cycle)
bama00030  Pentose phosphate pathway
bama00500  Starch and sucrose metabolism
bama00620  Pyruvate metabolism
bama00640  Propanoate metabolism
bama00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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