KEGG   PATHWAY: baut00630
Entry
baut00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bradyrhizobium brasilense
Class
Metabolism; Carbohydrate metabolism
Pathway map
baut00630  Glyoxylate and dicarboxylate metabolism
baut00630

Module
baut_M00012  Glyoxylate cycle [PATH:baut00630]
baut_M00621  Glycine cleavage system [PATH:baut00630]
baut_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:baut00630]
Other DBs
GO: 0046487 0043648
Organism
Bradyrhizobium brasilense [GN:baut]
Gene
QA635_31350  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
QA635_35620  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
QA635_01445  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
QA635_25230  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
QA635_34040  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
QA635_37940  malate synthase G [KO:K01638] [EC:2.3.3.9]
QA635_02140  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
QA635_40565  citrate synthase family protein [KO:K01647] [EC:2.3.3.1]
QA635_40570  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
QA635_21215  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
QA635_02095  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
QA635_38570  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_39265  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_39595  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_40860  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_07070  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_10225  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_11030  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_14505  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_19165  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
QA635_25300  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_25395  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_28850  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_33560  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
QA635_40855  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
QA635_30575  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
QA635_28355  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
QA635_32920  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
QA635_21020  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
QA635_20755  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
QA635_19420  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
QA635_19080  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
QA635_32140  biotin carboxylase N-terminal domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
QA635_28170  methylmalonyl-CoA mutase family protein [KO:K01847] [EC:5.4.99.2]
QA635_28180  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
QA635_36270  FAD-linked oxidase C-terminal domain-containing protein [KO:K00104] [EC:1.1.99.14]
QA635_36245  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
QA635_36240  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
QA635_09605  catalase [KO:K03781] [EC:1.11.1.6]
QA635_00315  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
QA635_37270  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
QA635_13045  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
QA635_25910  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
QA635_31445  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
QA635_27175  form I ribulose bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
QA635_27170  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
QA635_02555  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
QA635_15390  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
QA635_15400  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
QA635_04825  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
QA635_14430  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
QA635_20725  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
QA635_24070  glutamine synthetase beta-grasp domain-containing protein [KO:K01915] [EC:6.3.1.2]
QA635_31800  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
QA635_33755  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
QA635_20390  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
QA635_21280  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
QA635_16665  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
QA635_16675  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
QA635_02175  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
QA635_21475  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
QA635_16670  gcvH; glycine cleavage system protein GcvH [KO:K02437]
QA635_26485  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
QA635_26480  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
QA635_26475  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
QA635_39330  glycerate kinase [KO:K11529] [EC:2.7.1.165]
QA635_26515  glycerate kinase [KO:K11529] [EC:2.7.1.165]
QA635_37155  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
QA635_28940  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
QA635_25400  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
QA635_27590  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
QA635_08105  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
QA635_14140  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
QA635_26230  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
QA635_27580  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
QA635_14135  NAD(P)H-dependent oxidoreductase subunit E [KO:K22515] [EC:1.17.1.9]
QA635_08110  fdh3B; formate dehydrogenase FDH3 subunit beta [KO:K00124]
QA635_26225  fdh3B; formate dehydrogenase FDH3 subunit beta [KO:K00124]
QA635_27575  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
QA635_08115  formate dehydrogenase subunit gamma [KO:K00127]
QA635_26220  formate dehydrogenase subunit gamma [KO:K00127]
QA635_27570  formate dehydrogenase subunit gamma [KO:K00127]
QA635_27230  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
QA635_28950  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
QA635_15710  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
QA635_26950  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
QA635_30035  formamidase [KO:K01455] [EC:3.5.1.49]
QA635_27430  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
QA635_27435  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
baut00010  Glycolysis / Gluconeogenesis
baut00020  Citrate cycle (TCA cycle)
baut00030  Pentose phosphate pathway
baut00053  Ascorbate and aldarate metabolism
baut00071  Fatty acid degradation
baut00230  Purine metabolism
baut00250  Alanine, aspartate and glutamate metabolism
baut00260  Glycine, serine and threonine metabolism
baut00620  Pyruvate metabolism
baut00710  Carbon fixation by Calvin cycle
baut00750  Vitamin B6 metabolism
baut00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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