KEGG   PATHWAY: bgq00630
Entry
bgq00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bradyrhizobium guangdongense
Class
Metabolism; Carbohydrate metabolism
Pathway map
bgq00630  Glyoxylate and dicarboxylate metabolism
bgq00630

Module
bgq_M00012  Glyoxylate cycle [PATH:bgq00630]
bgq_M00621  Glycine cleavage system [PATH:bgq00630]
bgq_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bgq00630]
Other DBs
GO: 0046487 0043648
Organism
Bradyrhizobium guangdongense [GN:bgq]
Gene
X265_28860  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
X265_23625  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
X265_31150  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
X265_01400  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
X265_06790  malate synthase G [KO:K01638] [EC:2.3.3.9]
X265_01990  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
X265_03040  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
X265_03045  citrate synthase [KO:K01647] [EC:2.3.3.1]
X265_20700  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
X265_01940  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
X265_11495  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
X265_34100  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
X265_23670  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
X265_06460  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
X265_22555  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
X265_31320  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
X265_23750  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
X265_32815  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
X265_28990  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
X265_02830  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
X265_26270  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
X265_02835  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
X265_36830  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
X265_21035  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
X265_31260  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
X265_22220  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
X265_13480  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
X265_13475  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
X265_22630  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
X265_25730  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
X265_25740  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
X265_13485  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
X265_13490  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
X265_06230  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
X265_32005  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
X265_31995  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
X265_06235  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
X265_31990  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
X265_06240  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
X265_23245  catalase [KO:K03781] [EC:1.11.1.6]
X265_00305  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
X265_09680  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
X265_07355  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
X265_20120  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
X265_24550  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
X265_22000  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
X265_35920  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
X265_35750  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
X265_38545  hypothetical protein [KO:K01601] [EC:4.1.1.39]
X265_28110  rbcL; ribulose-bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
X265_38550  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
X265_28105  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
X265_02370  aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
X265_13580  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
X265_21260  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
X265_34680  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
X265_17435  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
X265_21540  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
X265_14900  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
X265_14910  glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
X265_20480  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
X265_13470  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
X265_02025  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
X265_14905  gcvH; glycine cleavage system protein GcvH [KO:K02437]
X265_25180  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
X265_25175  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
X265_25170  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
X265_06405  glycerate kinase [KO:K11529] [EC:2.7.1.165]
X265_38095  glycerate kinase [KO:K11529] [EC:2.7.1.165]
X265_10340  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
X265_38100  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
X265_26370  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
X265_23755  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
X265_25125  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
X265_25335  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
X265_25325  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
X265_29595  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
X265_29600  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
X265_25320  formate dehydrogenase [KO:K00124]
X265_25315  formate dehydrogenase subunit gamma [KO:K00127]
X265_17365  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
X265_13900  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
X265_16635  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
X265_25205  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
X265_25210  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bgq00010  Glycolysis / Gluconeogenesis
bgq00020  Citrate cycle (TCA cycle)
bgq00030  Pentose phosphate pathway
bgq00053  Ascorbate and aldarate metabolism
bgq00071  Fatty acid degradation
bgq00230  Purine metabolism
bgq00250  Alanine, aspartate and glutamate metabolism
bgq00260  Glycine, serine and threonine metabolism
bgq00620  Pyruvate metabolism
bgq00710  Carbon fixation by Calvin cycle
bgq00750  Vitamin B6 metabolism
bgq00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system