KEGG   PATHWAY: blen00630
Entry
blen00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Lederbergia lenta
Class
Metabolism; Carbohydrate metabolism
Pathway map
blen00630  Glyoxylate and dicarboxylate metabolism
blen00630

Other DBs
GO: 0046487 0043648
Organism
Lederbergia lenta [GN:blen]
Gene
NCTC4824_01230  acsA_2; AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
NCTC4824_01349  acsA_3; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
NCTC4824_01364  acsA_4; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NCTC4824_01400  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NCTC4824_01398  citZ; citrate synthase [KO:K01647] [EC:2.3.3.1]
NCTC4824_02399  citB; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
NCTC4824_03907  mmgA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NCTC4824_01063  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NCTC4824_01401  phaJ; MaoC like domain-containing protein [KO:K17865] [EC:4.2.1.55]
NCTC4824_01787  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
NCTC4824_01788  carboxyl transferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
NCTC4824_01780  mcmB; methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
NCTC4824_01781  mutA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
NCTC4824_03335  glcD; glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
NCTC4824_03336  lutA_2; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
NCTC4824_04067  katA; catalase [KO:K03781] [EC:1.11.1.6]
NCTC4824_04195  katE_3; catalase 2 [KO:K03781] [EC:1.11.1.6]
NCTC4824_00614  katE_1; Catalase related subgroup domain-containing protein [KO:K03781] [EC:1.11.1.6]
NCTC4824_00615  katE_2; Catalase related subgroup domain-containing protein [KO:K03781] [EC:1.11.1.6]
NCTC4824_01420  katX; major catalase in spores [KO:K03781] [EC:1.11.1.6]
NCTC4824_01092  yvcT; 2-ketogluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
NCTC4824_00986  hydrolase [KO:K01091] [EC:3.1.3.18]
NCTC4824_02575  glnA; L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
NCTC4824_03880  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NCTC4824_02811  pdhD; dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
NCTC4824_01776  bfmBC; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NCTC4824_03327  gcvH; glycine cleavage system protein H [KO:K02437]
NCTC4824_00686  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
NCTC4824_02459  dgoA_3; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NCTC4824_00832  dgoA_1; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NCTC4824_00339  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
blen00010  Glycolysis / Gluconeogenesis
blen00020  Citrate cycle (TCA cycle)
blen00030  Pentose phosphate pathway
blen00053  Ascorbate and aldarate metabolism
blen00071  Fatty acid degradation
blen00230  Purine metabolism
blen00250  Alanine, aspartate and glutamate metabolism
blen00260  Glycine, serine and threonine metabolism
blen00620  Pyruvate metabolism
blen00710  Carbon fixation by Calvin cycle
blen00750  Vitamin B6 metabolism
blen00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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