KEGG   PATHWAY: bmed00010
Entry
bmed00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Brevundimonas mediterranea
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bmed00010  Glycolysis / Gluconeogenesis
bmed00010

Module
bmed_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bmed00010]
bmed_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bmed00010]
Other DBs
GO: 0006096 0006094
Organism
Brevundimonas mediterranea [GN:bmed]
Gene
GYM46_05165  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
GYM46_07685  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GYM46_12800  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
GYM46_03945  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
GYM46_14905  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
GYM46_03930  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GYM46_03940  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GYM46_04695  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
GYM46_16345  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GYM46_12645  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GYM46_12425  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
GYM46_16335  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
GYM46_16330  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
GYM46_16325  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
GYM46_02235  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYM46_07185  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYM46_07770  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYM46_08810  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYM46_16315  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GYM46_10970  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GYM46_00700  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
GYM46_11285  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
GYM46_00705  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
GYM46_15945  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GYM46_16590  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
GYM46_11080  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
GYM46_08525  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bmed00020  Citrate cycle (TCA cycle)
bmed00030  Pentose phosphate pathway
bmed00500  Starch and sucrose metabolism
bmed00620  Pyruvate metabolism
bmed00640  Propanoate metabolism
bmed00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system