KEGG   PATHWAY: bmq00030
Entry
bmq00030                    Pathway                                
Name
Pentose phosphate pathway - Priestia megaterium QM B1551
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bmq00030  Pentose phosphate pathway
bmq00030

Module
bmq_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bmq00030]
bmq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bmq00030]
bmq_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bmq00030]
bmq_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bmq00030]
bmq_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bmq00030]
bmq_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:bmq00030]
Other DBs
GO: 0006098
Organism
Priestia megaterium QM B1551 [GN:bmq]
Gene
BMQ_4937  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BMQ_5210  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BMQ_1958  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BMQ_1536  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BMQ_3262  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BMQ_0309  conserved hypothetical protein [KO:K07404] [EC:3.1.1.31]
BMQ_0752  gnd; 6-phosphogluconate dehydrogenase (decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BMQ_5211  gnd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BMQ_3260  gnd; 6-phosphogluconate dehydrogenase (decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BMQ_1336  gnd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BMQ_4233  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BMQ_4088  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
BMQ_1643  tktA; transketolase, thiamine diphosphate binding domain (N-terminal subunit) [KO:K00615] [EC:2.2.1.1]
BMQ_1644  tktB; transketolase, pyrimidine binding domain (C-terminal subunit) [KO:K00615] [EC:2.2.1.1]
BMQ_3261  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
BMQ_5174  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
BMQ_1854  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
BMQ_2328  talC; transaldolase [KO:K00616] [EC:2.2.1.2]
BMQ_3259  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
BMQ_1026  rpiA; ribose 5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
BMQ_5162  rpiB; ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
BMQ_1649  rpiB; ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
BMQ_1538  hxlA; 3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
BMQ_0891  hxlA; 3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
BMQ_2942  hxlA; 3-hexulose-6-phosphate synthase [KO:K08093] [EC:4.1.2.43]
BMQ_0890  6-phospho 3-hexuloisomerase domain protein [KO:K08094] [EC:5.3.1.27]
BMQ_2941  6-phospho 3-hexuloisomerase domain protein [KO:K08094] [EC:5.3.1.27]
BMQ_2779  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
BMQ_0922  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
BMQ_4396  drm; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
BMQ_0533  pgcA; alpha-phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BMQ_0070  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
BMQ_3633  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BMQ_2944  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BMQ_1851  gapN; aldehyde dehydrogenase (NAD) family protein [KO:K00131] [EC:1.2.1.9]
BMQ_0838  gdh; Glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
BMQ_1051  glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
BMQ_3371  glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
BMQ_0753  gntK; gluconate kinase [KO:K25031] [EC:2.7.1.12]
BMQ_1509  carbohydrate kinase, PfkB family protein [KO:K00874] [EC:2.7.1.45]
BMQ_2946  kinase, pfkB family [KO:K00874] [EC:2.7.1.45]
BMQ_3634  kinase, pfkB family [KO:K00874] [EC:2.7.1.45]
BMQ_5175  fba; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BMQ_3396  fbp; fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
BMQ_3992  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
BMQ_1648  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
bmq00010  Glycolysis / Gluconeogenesis
bmq00040  Pentose and glucuronate interconversions
bmq00052  Galactose metabolism
bmq00230  Purine metabolism
bmq00240  Pyrimidine metabolism
bmq00340  Histidine metabolism
bmq00630  Glyoxylate and dicarboxylate metabolism
bmq00750  Vitamin B6 metabolism
KO pathway
ko00030   
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