KEGG   PATHWAY: bthi00020
Entry
bthi00020                   Pathway                                
Name
Citrate cycle (TCA cycle) - Bacillus thuringiensis serovar kurstaki HD-1
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bthi00020  Citrate cycle (TCA cycle)
bthi00020

Module
bthi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bthi00020]
bthi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:bthi00020]
bthi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bthi00020]
bthi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bthi00020]
bthi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bthi00020]
Other DBs
GO: 0006099
Organism
Bacillus thuringiensis serovar kurstaki HD-1 [GN:bthi]
Gene
BTK_12770  citrate synthase 3 [KO:K01647] [EC:2.3.3.1]
BTK_24110  citrate synthase [KO:K01647] [EC:2.3.3.1]
BTK_19140  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
BTK_24105  isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
BTK_07600  sucA; 2-oxoglutarate dehydrogenase E1 component [KO:K00164] [EC:1.2.4.2]
BTK_07595  dihydrolipoamide succinyltransferase [KO:K00658] [EC:2.3.1.61]
BTK_15945  acoL; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BTK_21985  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BTK_20945  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BTK_19965  2-oxoglutarate synthase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
BTK_19960  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
BTK_20260  succinyl-CoA synthetase subunit alpha [KO:K01902] [EC:6.2.1.5]
BTK_20265  sucC; succinyl-CoA synthetase subunit beta [KO:K01903] [EC:6.2.1.5]
BTK_10315  succinate CoA transferase [KO:K18118] [EC:2.8.3.18]
BTK_23705  sdhA; succinate dehydrogenase flavoprotein subunit [KO:K00239] [EC:1.3.5.1]
BTK_23700  sdhB; succinate dehydrogenase iron-sulfur subunit [KO:K00240] [EC:1.3.5.1]
BTK_23710  succinate dehydrogenase, cytochrome b558 subunit [KO:K00241]
BTK_02825  fumarate hydratase [KO:K01676] [EC:4.2.1.2]
BTK_09905  fumC; fumarate hydratase [KO:K01679] [EC:4.2.1.2]
BTK_24100  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BTK_14925  malate:quinone oxidoreductase [KO:K00116] [EC:1.1.5.4]
BTK_20835  pyruvate carboxylase [KO:K01958] [EC:6.4.1.1]
BTK_25035  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
BTK_20960  pyruvate dehydrogenase complex E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
BTK_20955  pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
BTK_15940  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
BTK_20950  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bthi00010  Glycolysis / Gluconeogenesis
bthi00053  Ascorbate and aldarate metabolism
bthi00061  Fatty acid biosynthesis
bthi00071  Fatty acid degradation
bthi00190  Oxidative phosphorylation
bthi00220  Arginine biosynthesis
bthi00250  Alanine, aspartate and glutamate metabolism
bthi00280  Valine, leucine and isoleucine degradation
bthi00350  Tyrosine metabolism
bthi00470  D-Amino acid metabolism
bthi00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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