KEGG   PATHWAY: buo00030
Entry
buo00030                    Pathway                                
Name
Pentose phosphate pathway - Caballeronia insecticola
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
buo00030  Pentose phosphate pathway
buo00030

Module
buo_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:buo00030]
buo_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:buo00030]
buo_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:buo00030]
buo_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:buo00030]
buo_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:buo00030]
Other DBs
GO: 0006098
Organism
Caballeronia insecticola [GN:buo]
Gene
BRPE64_ACDS13690  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BRPE64_BCDS05940  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BRPE64_ACDS08130  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BRPE64_BCDS00520  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BRPE64_ACDS08140  6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
BRPE64_ACDS09120  ybhE; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
BRPE64_BCDS13310  6-phosphogluconate dehydrogenase decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BRPE64_ACDS12880  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BRPE64_ACDS24410  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BRPE64_DCDS04540  transketolase central region [KO:K00615] [EC:2.2.1.1]
BRPE64_DCDS04550  transketolase domain protein [KO:K00615] [EC:2.2.1.1]
BRPE64_BCDS01450  transketolase [KO:K00615] [EC:2.2.1.1]
BRPE64_CCDS04450  transketolase domain protein [KO:K00615] [EC:2.2.1.1]
BRPE64_CCDS04460  transketolase central region [KO:K00615] [EC:2.2.1.1]
BRPE64_CCDS04500  transketolase [KO:K00615] [EC:2.2.1.1]
BRPE64_ACDS12870  transketolase [KO:K00615] [EC:2.2.1.1]
BRPE64_ACDS23330  transketolase 1 [KO:K00615] [EC:2.2.1.1]
BRPE64_ACDS08940  transaldolase [KO:K00616] [EC:2.2.1.2]
BRPE64_ACDS16410  rpiA; ribose-5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
BRPE64_BCDS06430  probable phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
BRPE64_DCDS05650  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
BRPE64_ACDS14110  ribokinase [KO:K00852] [EC:2.7.1.15]
BRPE64_DCDS05680  ribokinase [KO:K00852] [EC:2.7.1.15]
BRPE64_ACDS21390  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
BRPE64_BCDS01950  phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [KO:K05774] [EC:2.7.4.23]
BRPE64_ACDS02420  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BRPE64_ACDS23150  edd; 6-phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
BRPE64_ACDS23140  eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BRPE64_BCDS06070  short-chain dehydrogenase/reductase SDR [KO:K00034] [EC:1.1.1.47]
BRPE64_ACDS21180  choline dehydrogenase-like flavoprotein [KO:K19813] [EC:1.1.5.9]
BRPE64_DCDS01530  gcd; membrane-bound PQQ-dependent dehydrogenase glucose/quinate/shikimate family [KO:K00117] [EC:1.1.5.2]
BRPE64_CCDS03350  gluconolactonase [KO:K01053] [EC:3.1.1.17]
BRPE64_CCDS02980  SMP-30/Gluconolaconase/LRE domain protein [KO:K01053] [EC:3.1.1.17]
BRPE64_CCDS03860  gluconolactonase [KO:K01053] [EC:3.1.1.17]
BRPE64_BCDS10790  gluconolactonase [KO:K01053] [EC:3.1.1.17]
BRPE64_ACDS19980  putative 2-ketogluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BRPE64_ACDS15250  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BRPE64_ECDS01190  putative 2-Ketogluconate-6-phosphate reductase [KO:K00032] [EC:1.1.1.43]
BRPE64_ACDS23110  gntK; carbohydrate kinase thermoresistant glucokinase family [KO:K00851] [EC:2.7.1.12]
BRPE64_ACDS15270  PfkB domain protein [KO:K00874] [EC:2.7.1.45]
BRPE64_ACDS15620  PfkB domain protein [KO:K00874] [EC:2.7.1.45]
BRPE64_DCDS10610  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
BRPE64_ACDS04930  fructose-bisphosphate aldolase class II Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
BRPE64_BCDS01460  fructose-bisphosphate aldolase class II Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
BRPE64_ACDS07650  fructose-1,6-bisphosphatase class 1,1 [KO:K03841] [EC:3.1.3.11]
BRPE64_BCDS01430  fructose-1,6-bisphosphatase class 1,2 [KO:K01086] [EC:3.1.3.11 3.1.3.37]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
buo00010  Glycolysis / Gluconeogenesis
buo00040  Pentose and glucuronate interconversions
buo00052  Galactose metabolism
buo00230  Purine metabolism
buo00240  Pyrimidine metabolism
buo00340  Histidine metabolism
buo00630  Glyoxylate and dicarboxylate metabolism
buo00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

DBGET integrated database retrieval system