KEGG   PATHWAY: buz00970
Entry
buz00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Paraburkholderia phytofirmans OLGA172
Class
Genetic Information Processing; Translation
Pathway map
buz00970  Aminoacyl-tRNA biosynthesis
buz00970

Organism
Paraburkholderia phytofirmans OLGA172 [GN:buz]
Gene
AYM40_05385  tRNA-Ala [KO:K14218]
AYM40_12935  tRNA-Ala [KO:K14218]
AYM40_00750  tRNA-Ala [KO:K14218]
AYM40_18210  tRNA-Ala [KO:K14218]
AYM40_19045  tRNA-Ala [KO:K14218]
AYM40_22530  tRNA-Ala [KO:K14218]
AYM40_24110  tRNA-Ala [KO:K14218]
AYM40_25540  tRNA-Ala [KO:K14218]
AYM40_33210  tRNA-Ala [KO:K14218]
AYM40_15485  tRNA-Arg [KO:K14219]
AYM40_14320  tRNA-Arg [KO:K14219]
AYM40_04300  tRNA-Arg [KO:K14219]
AYM40_19900  tRNA-Arg [KO:K14219]
AYM40_15490  tRNA-Arg [KO:K14219]
AYM40_14810  tRNA-Asn [KO:K14220]
AYM40_14815  tRNA-Asn [KO:K14220]
AYM40_12915  tRNA-Asp [KO:K14221]
AYM40_11055  tRNA-Asp [KO:K14221]
AYM40_12925  tRNA-Asp [KO:K14221]
AYM40_14570  tRNA-Cys [KO:K14222]
AYM40_01665  tRNA-Gln [KO:K14223]
AYM40_12920  tRNA-Glu [KO:K14224]
AYM40_12930  tRNA-Glu [KO:K14224]
AYM40_16025  tRNA-Gly [KO:K14225]
AYM40_14575  tRNA-Gly [KO:K14225]
AYM40_14580  tRNA-Gly [KO:K14225]
AYM40_19025  tRNA-Gly [KO:K14225]
AYM40_11620  tRNA-His [KO:K14226]
AYM40_24105  tRNA-Ile [KO:K14227]
AYM40_05380  tRNA-Ile [KO:K14227]
AYM40_18215  tRNA-Ile [KO:K14227]
AYM40_19050  tRNA-Ile [KO:K14227]
AYM40_22525  tRNA-Ile [KO:K14227]
AYM40_25535  tRNA-Ile [KO:K14227]
AYM40_33215  tRNA-Ile [KO:K14227]
AYM40_16055  tRNA-Leu [KO:K14228]
AYM40_11800  tRNA-Leu [KO:K14228]
AYM40_11160  tRNA-Leu [KO:K14228]
AYM40_11795  tRNA-Leu [KO:K14228]
AYM40_13625  tRNA-Leu [KO:K14228]
AYM40_05180  tRNA-Leu [KO:K14228]
AYM40_00235  tRNA-Lys [KO:K14229]
AYM40_02575  tRNA-Lys [KO:K14229]
AYM40_11705  tRNA-Met [KO:K14230]
AYM40_17210  tRNA-Met [KO:K14230]
AYM40_13475  tRNA-Met [KO:K14230]
AYM40_00320  tRNA-Phe [KO:K14231]
AYM40_17945  tRNA-Pro [KO:K14232]
AYM40_14365  tRNA-Pro [KO:K14232]
AYM40_13915  tRNA-Pro [KO:K14232]
AYM40_12985  tRNA-Ser [KO:K14233]
AYM40_05690  tRNA-Ser [KO:K14233]
AYM40_03980  tRNA-Ser [KO:K14233]
AYM40_15535  tRNA-Ser [KO:K14233]
AYM40_19020  tRNA-Thr [KO:K14234]
AYM40_15445  tRNA-Thr [KO:K14234]
AYM40_18485  tRNA-Thr [KO:K14234]
AYM40_19010  tRNA-Trp [KO:K14235]
AYM40_19030  tRNA-Tyr [KO:K14236]
AYM40_13960  tRNA-Val [KO:K14237]
AYM40_33190  tRNA-Val [KO:K14237]
AYM40_11100  tRNA-Val [KO:K14237]
AYM40_14500  tRNA-Val [KO:K14237]
AYM40_29910  tRNA-Sec [KO:K14238]
AYM40_12940  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
AYM40_00380  aspartyl/glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
AYM40_15300  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
AYM40_00385  gatB; glutamyl-tRNA amidotransferase [KO:K02434] [EC:6.3.5.6 6.3.5.7]
AYM40_00375  asparaginyl/glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
AYM40_14290  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
AYM40_14270  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
AYM40_02005  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
AYM40_02155  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
AYM40_13955  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
AYM40_03975  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
AYM40_29920  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
AYM40_13010  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
AYM40_25600  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
AYM40_03855  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
AYM40_09430  formyltransferase [KO:K00604] [EC:2.1.2.9]
AYM40_00285  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
AYM40_14125  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
AYM40_17615  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
AYM40_16380  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
AYM40_13330  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
AYM40_01070  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
AYM40_17905  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
AYM40_13170  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
AYM40_13935  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
AYM40_13930  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
AYM40_17465  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
AYM40_13220  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
buz00250  Alanine, aspartate and glutamate metabolism
buz00260  Glycine, serine and threonine metabolism
buz00270  Cysteine and methionine metabolism
buz00290  Valine, leucine and isoleucine biosynthesis
buz00300  Lysine biosynthesis
buz00330  Arginine and proline metabolism
buz00340  Histidine metabolism
buz00380  Tryptophan metabolism
buz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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