KEGG   PATHWAY: cale00010
Entry
cale00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Caloramator sp. E03
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cale00010  Glycolysis / Gluconeogenesis
cale00010

Module
cale_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cale00010]
cale_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cale00010]
cale_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cale00010]
cale_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cale00010]
Other DBs
GO: 0006096 0006094
Organism
Caloramator sp. E03 [GN:cale]
Gene
FDN13_08350  hexokinase [KO:K00844] [EC:2.7.1.1]
FDN13_10590  ROK family protein [KO:K25026] [EC:2.7.1.2]
FDN13_13255  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FDN13_10095  cupin domain-containing protein [KO:K06859] [EC:5.3.1.9]
FDN13_12620  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
FDN13_09785  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
FDN13_01740  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
FDN13_06595  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
FDN13_13380  fba; class II fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
FDN13_10255  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FDN13_13625  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FDN13_13615  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FDN13_09895  type II glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
FDN13_09900  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FDN13_13620  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FDN13_13630  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
FDN13_13635  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
FDN13_12625  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FDN13_01055  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
FDN13_08415  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FDN13_03550  porA; pyruvate ferredoxin oxidoreductase [KO:K00169] [EC:1.2.7.1]
FDN13_03545  pyruvate ferredoxin oxidoreductase [KO:K00170] [EC:1.2.7.1]
FDN13_03560  pyruvate synthase [KO:K00172] [EC:1.2.7.1]
FDN13_03555  ferredoxin [KO:K00171] [EC:1.2.7.1]
FDN13_11345  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
FDN13_11440  vorB; 3-methyl-2-oxobutanoate dehydrogenase subunit VorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
FDN13_11445  2-oxoglutarate oxidoreductase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
FDN13_12110  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
FDN13_03810  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
FDN13_01770  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
FDN13_12700  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
FDN13_09455  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
FDN13_11590  glycosyl hydrolase family protein [KO:K01223] [EC:3.2.1.86]
FDN13_08830  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
FDN13_09450  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
FDN13_11780  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
FDN13_03470  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
FDN13_04985  PTS glucose transporter subunit IICBA [KO:K20118] [EC:2.7.1.199]
FDN13_03475  PTS glucose transporter subunit IIA [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
cale00020  Citrate cycle (TCA cycle)
cale00030  Pentose phosphate pathway
cale00500  Starch and sucrose metabolism
cale00620  Pyruvate metabolism
cale00640  Propanoate metabolism
cale00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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