KEGG   PATHWAY: cbr00630
Entry
cbr00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Caenorhabditis briggsae (nematode)
Class
Metabolism; Carbohydrate metabolism
Pathway map
cbr00630  Glyoxylate and dicarboxylate metabolism
cbr00630

Module
cbr_M00012  Glyoxylate cycle [PATH:cbr00630]
cbr_M00621  Glycine cleavage system [PATH:cbr00630]
cbr_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:cbr00630]
Other DBs
GO: 0046487 0043648
Organism
Caenorhabditis briggsae (nematode) [GN:cbr]
Gene
CBG_06335  Cbr-icl-1; Protein CBR-ICL-1 [KO:K01637 K01638] [EC:4.1.3.1 2.3.3.9]
CBG_03613  Protein CBG03613 [KO:K01895] [EC:6.2.1.1]
CBG_18957  Cbr-mdh-1; Protein CBR-MDH-1 [KO:K00025] [EC:1.1.1.37]
CBG_15213  Cbr-mdh-2; Protein CBR-MDH-2 [KO:K00026] [EC:1.1.1.37]
CBG_09810  Cbr-cts-1; Protein CBR-CTS-1 [KO:K01647] [EC:2.3.3.1]
CBG_22943  Cbr-aco-2; Protein CBR-ACO-2 [KO:K01681] [EC:4.2.1.3]
CBG_17361  Cbr-aco-1; Protein CBR-ACO-1 [KO:K01681] [EC:4.2.1.3]
CBG_24740  Protein CBG24740 [KO:K00626] [EC:2.3.1.9]
CBG_24741  Cbr-kat-1; Protein CBR-KAT-1 [KO:K00626] [EC:2.3.1.9]
CBG_11959  Cbr-mce-1; Protein CBR-MCE-1 [KO:K05606] [EC:5.1.99.1]
CBG_16755  Cbr-pcca-1; Protein CBR-PCCA-1 [KO:K01965] [EC:6.4.1.3]
CBG_14130  Cbr-pccb-1; Protein CBR-PCCB-1 [KO:K01966] [EC:6.4.1.3 2.1.3.15]
CBG_03603  Cbr-mmcm-1; Protein CBR-MMCM-1 [KO:K01847] [EC:5.4.99.2]
CBG_01477  Protein CBG01477 [KO:K11517] [EC:1.1.3.15]
CBG_20805  Cbr-ctl-3; Protein CBR-CTL-3 [KO:K03781] [EC:1.11.1.6]
CBG_20807  Cbr-ctl-2; Protein CBR-CTL-2 [KO:K03781] [EC:1.11.1.6]
CBG_09323  Protein CBG09323 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
CBG_19872  Protein CBG19872 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
CBG_09325  Protein CBG09325 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
CBG_03195  Protein CBG03195 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CBG_20640  Protein CBG20640 [KO:K01915] [EC:6.3.1.2]
CBG_20737  Cbr-gln-2; Protein CBR-GLN-2 [KO:K01915] [EC:6.3.1.2]
CBG_13820  Cbr-gln-3; Protein CBR-GLN-3 [KO:K01915] [EC:6.3.1.2]
CBG_19879  Cbr-gln-5; Protein CBR-GLN-5 [KO:K01915] [EC:6.3.1.2]
CBG_14820  Cbr-gln-1; Protein CBR-GLN-1 [KO:K01915] [EC:6.3.1.2]
CBG_19673  Cbr-mel-32; Protein CBR-MEL-32 [KO:K00600] [EC:2.1.2.1]
CBG_02570  Protein CBG02570 [KO:K00281] [EC:1.4.4.2]
CBG_09336  Protein CBG09336 [KO:K00605] [EC:2.1.2.10]
CBG_21577  Cbr-dld-1; Protein CBR-DLD-1 [KO:K00382] [EC:1.8.1.4]
CBG_07481  Cbr-gcsh-1; Protein CBR-GCSH-1 [KO:K02437]
CBG_11916  Protein CBG11916 [KO:K02437]
CBG_19664  Protein CBG19664 [KO:K01816] [EC:5.3.1.22]
CBG_15194  Protein CBG15194 [KO:K11529] [EC:2.7.1.165]
CBG_05817  Protein CBG05817 [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cbr00010  Glycolysis / Gluconeogenesis
cbr00020  Citrate cycle (TCA cycle)
cbr00030  Pentose phosphate pathway
cbr00053  Ascorbate and aldarate metabolism
cbr00071  Fatty acid degradation
cbr00230  Purine metabolism
cbr00250  Alanine, aspartate and glutamate metabolism
cbr00260  Glycine, serine and threonine metabolism
cbr00620  Pyruvate metabolism
cbr00750  Vitamin B6 metabolism
cbr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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