KEGG   PATHWAY: ccat00020
Entry
ccat00020                   Pathway                                
Name
Citrate cycle (TCA cycle) - Ceratitis capitata (Mediterranean fruit fly)
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ccat00020  Citrate cycle (TCA cycle)
ccat00020

Module
ccat_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ccat00020]
ccat_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ccat00020]
ccat_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ccat00020]
ccat_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ccat00020]
ccat_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ccat00020]
Other DBs
GO: 0006099
Organism
Ceratitis capitata (Mediterranean fruit fly) [GN:ccat]
Gene
101460758  probable citrate synthase 2, mitochondrial [KO:K01647] [EC:2.3.3.1]
101456621  probable citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
101454151  ATP-citrate synthase isoform X1 [KO:K01648] [EC:2.3.3.8]
101449935  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
101453531  cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
101457972  isocitrate dehydrogenase [NADP] cytoplasmic isoform X1 [KO:K00031] [EC:1.1.1.42]
101454269  probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X2 [KO:K00030] [EC:1.1.1.41]
101460520  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X2 [KO:K00030] [EC:1.1.1.41]
101450167  isocitrate dehydrogenase [NAD] subunit beta, mitochondrial [KO:K00030] [EC:1.1.1.41]
101453861  2-oxoglutarate dehydrogenase, mitochondrial isoform X3 [KO:K00164] [EC:1.2.4.2]
101448403  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [KO:K00658] [EC:2.3.1.61]
101450220  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
101456211  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
101449630  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
101453640  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
101452277  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X3 [KO:K01900] [EC:6.2.1.4 6.2.1.5]
101453232  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
101449669  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
101452021  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [KO:K00235] [EC:1.3.5.1]
101454842  succinate dehydrogenase [ubiquinone] iron-sulfur subunit-like [KO:K00235] [EC:1.3.5.1]
101451969  succinate dehydrogenase cytochrome b560 subunit, mitochondrial [KO:K00236]
101452349  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237]
101450355  fumarate hydratase, mitochondrial isoform X1 [KO:K01679] [EC:4.2.1.2]
101462854  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
101460235  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
101463044  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
101453583  uncharacterized protein LOC101453583 [KO:K00026] [EC:1.1.1.37]
101449780  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
101462308  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
101449740  pyruvate carboxylase, mitochondrial isoform X1 [KO:K01958] [EC:6.4.1.1]
101458094  phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
101458268  phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
101454459  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
101458502  pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1 [KO:K00162] [EC:1.2.4.1]
101463031  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1 [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ccat00010  Glycolysis / Gluconeogenesis
ccat00053  Ascorbate and aldarate metabolism
ccat00061  Fatty acid biosynthesis
ccat00062  Fatty acid elongation
ccat00071  Fatty acid degradation
ccat00190  Oxidative phosphorylation
ccat00220  Arginine biosynthesis
ccat00250  Alanine, aspartate and glutamate metabolism
ccat00280  Valine, leucine and isoleucine degradation
ccat00350  Tyrosine metabolism
ccat00470  D-Amino acid metabolism
ccat00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

DBGET integrated database retrieval system