KEGG   PATHWAY: cib00010
Entry
cib00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Citrobacter sp. TSA-1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cib00010  Glycolysis / Gluconeogenesis
cib00010

Module
cib_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cib00010]
cib_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cib00010]
cib_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cib00010]
cib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cib00010]
Other DBs
GO: 0006096 0006094
Organism
Citrobacter sp. TSA-1 [GN:cib]
Gene
HF677_007065  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
HF677_022175  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HF677_019795  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
HF677_019800  glucose-6-phosphate isomerase [KO:K06859] [EC:5.3.1.9]
HF677_022745  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
HF677_013210  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
HF677_020810  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
HF677_022705  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
HF677_003980  yggF; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
HF677_008605  fbaB; class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
HF677_000360  class II fructose-bisphosphate aldolase family protein [KO:K01624] [EC:4.1.2.13]
HF677_000365  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
HF677_021870  ketose 1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
HF677_004005  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
HF677_022725  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
HF677_012715  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HF677_013490  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HF677_004000  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HF677_016050  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
HF677_020000  gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB [KO:K15634] [EC:5.4.2.11]
HF677_000565  gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
HF677_004700  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HF677_012900  pykF; pyruvate kinase PykF [KO:K00873] [EC:2.7.1.40]
HF677_013795  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HF677_013045  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
HF677_019345  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
HF677_019340  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
HF677_019335  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HF677_011340  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
HF677_011430  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HF677_010830  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
HF677_000680  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
HF677_022835  fucO; lactaldehyde reductase [KO:K00001] [EC:1.1.1.1]
HF677_020530  NAD(P)-dependent alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
HF677_006775  eutG; ethanolamine utilization ethanol dehydrogenase EutG [KO:K04022]
HF677_012765  cytochrome c [KO:K22474] [EC:1.1.5.5]
HF677_000685  aldB; aldehyde dehydrogenase AldB [KO:K00138] [EC:1.2.1.-]
HF677_021935  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HF677_006350  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
HF677_016045  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
HF677_022990  aldose-1-epimerase [KO:K01785] [EC:5.1.3.3]
HF677_014870  agp; bifunctional glucose-1-phosphatase/inositol phosphatase [KO:K01085] [EC:3.1.3.10]
HF677_022960  yihX; glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
HF677_016435  pgm; alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
HF677_013495  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
HF677_001470  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
HF677_020795  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
HF677_013260  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
HF677_000210  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
HF677_004125  bglA; 6-phospho-beta-glucosidase BglA [KO:K01223] [EC:3.2.1.86]
HF677_005155  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
HF677_006585  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
HF677_006915  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
HF677_014440  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
HF677_007040  PTS transporter subunit EIIC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
HF677_012305  PTS maltose transporter subunit IICB [KO:K02791] [EC:2.7.1.199 2.7.1.208]
HF677_005160  ascF; PTS cellobiose/arbutin/salicin transporter subunit IIBC [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
cib00020  Citrate cycle (TCA cycle)
cib00030  Pentose phosphate pathway
cib00500  Starch and sucrose metabolism
cib00620  Pyruvate metabolism
cib00640  Propanoate metabolism
cib00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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