KEGG   PATHWAY: ckr00970
Entry
ckr00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Clostridium kluyveri NBRC 12016
Class
Genetic Information Processing; Translation
Pathway map
ckr00970  Aminoacyl-tRNA biosynthesis
ckr00970

Organism
Clostridium kluyveri NBRC 12016 [GN:ckr]
Gene
CKR_tRNA02-Ala  tRNA-Ala [KO:K14218]
CKR_tRNA25-Ala  tRNA-Ala [KO:K14218]
CKR_tRNA22-Ala  tRNA-Ala [KO:K14218]
CKR_tRNA35-Pseudo  tRNA-Pseudo [KO:K14218]
CKR_tRNA05-Arg  tRNA-Arg [KO:K14219]
CKR_tRNA50-Arg  tRNA-Arg [KO:K14219]
CKR_tRNA06-Arg  tRNA-Arg [KO:K14219]
CKR_tRNA42-Arg  tRNA-Arg [KO:K14219]
CKR_tRNA21-Asn  tRNA-Asn [KO:K14220]
CKR_tRNA31-Asn  tRNA-Asn [KO:K14220]
CKR_tRNA37-Asp  tRNA-Asp [KO:K14221]
CKR_tRNA10-Asp  tRNA-Asp [KO:K14221]
CKR_tRNA13-Asp  tRNA-Asp [KO:K14221]
CKR_tRNA40-Cys  tRNA-Cys [KO:K14222]
CKR_tRNA53-Gln  tRNA-Gln [KO:K14223]
CKR_tRNA47-Gln  tRNA-Gln [KO:K14223]
CKR_tRNA08-Glu  tRNA-Glu [KO:K14224]
CKR_tRNA11-Glu  tRNA-Glu [KO:K14224]
CKR_tRNA32-Glu  tRNA-Glu [KO:K14224]
CKR_tRNA44-Gly  tRNA-Gly [KO:K14225]
CKR_tRNA39-Gly  tRNA-Gly [KO:K14225]
CKR_tRNA43-Gly  tRNA-Gly [KO:K14225]
CKR_tRNA51-Gly  tRNA-Gly [KO:K14225]
CKR_tRNA26-Gly  tRNA-Gly [KO:K14225]
CKR_tRNA48-His  tRNA-His [KO:K14226]
CKR_tRNA23-Ile  tRNA-Ile [KO:K14227]
CKR_tRNA29-Ile  tRNA-Ile [KO:K14227]
CKR_tRNA15-Leu  tRNA-Leu [KO:K14228]
CKR_tRNA18-Leu  tRNA-Leu [KO:K14228]
CKR_tRNA45-Leu  tRNA-Leu [KO:K14228]
CKR_tRNA33-Leu  tRNA-Leu [KO:K14228]
CKR_tRNA28-Leu  tRNA-Leu [KO:K14228]
CKR_tRNA41-Leu  tRNA-Leu [KO:K14228]
CKR_tRNA59-Lys  tRNA-Lys [KO:K14229]
CKR_tRNA46-Lys  tRNA-Lys [KO:K14229]
CKR_tRNA49-Lys  tRNA-Lys [KO:K14229]
CKR_tRNA20-Met  tRNA-Met [KO:K14230]
CKR_tRNA17-Met  tRNA-Met [KO:K14230]
CKR_tRNA01-Met  tRNA-Met [KO:K14230]
CKR_tRNA24-Met  tRNA-Met [KO:K14230]
CKR_tRNA16-Met  tRNA-Met [KO:K14230]
CKR_tRNA19-Met  tRNA-Met [KO:K14230]
CKR_tRNA30-Phe  tRNA-Phe [KO:K14231]
CKR_tRNA38-Phe  tRNA-Phe [KO:K14231]
CKR_tRNA52-Pro  tRNA-Pro [KO:K14232]
CKR_tRNA04-Ser  tRNA-Ser [KO:K14233]
CKR_tRNA03-Ser  tRNA-Ser [KO:K14233]
CKR_tRNA60-Ser  tRNA-Ser [KO:K14233]
CKR_tRNA07-Ser  tRNA-Ser [KO:K14233]
CKR_tRNA14-Thr  tRNA-Thr [KO:K14234]
CKR_tRNA58-Thr  tRNA-Thr [KO:K14234]
CKR_tRNA55-Thr  tRNA-Thr [KO:K14234]
CKR_tRNA27-Thr  tRNA-Thr [KO:K14234]
CKR_tRNA61-Thr  tRNA-Thr [KO:K14234]
CKR_tRNA34-Trp  tRNA-Trp [KO:K14235]
CKR_tRNA54-Tyr  tRNA-Tyr [KO:K14236]
CKR_tRNA57-Tyr  tRNA-Tyr [KO:K14236]
CKR_tRNA09-Val  tRNA-Val [KO:K14237]
CKR_tRNA12-Val  tRNA-Val [KO:K14237]
CKR_tRNA56-Val  tRNA-Val [KO:K14237]
CKR_tRNA36-Val  tRNA-Val [KO:K14237]
CKR_1351  hypothetical protein [KO:K01885] [EC:6.1.1.17]
CKR_3060  hypothetical protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CKR_3059  hypothetical protein [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CKR_3061  hypothetical protein [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CKR_0926  hypothetical protein [KO:K01886] [EC:6.1.1.18]
CKR_1220  hypothetical protein [KO:K01872] [EC:6.1.1.7]
CKR_2766  hypothetical protein [KO:K01876] [EC:6.1.1.12]
CKR_0094  hypothetical protein [KO:K01893] [EC:6.1.1.22]
CKR_0889  hypothetical protein [KO:K01893] [EC:6.1.1.22]
CKR_0148  hypothetical protein [KO:K01880] [EC:6.1.1.14]
CKR_2834  hypothetical protein [KO:K01868] [EC:6.1.1.3]
CKR_0013  hypothetical protein [KO:K01875] [EC:6.1.1.11]
CKR_0162  hypothetical protein [KO:K01883] [EC:6.1.1.16]
CKR_3329  hypothetical protein [KO:K01874] [EC:6.1.1.10]
CKR_1266  hypothetical protein [KO:K00604] [EC:2.1.2.9]
CKR_2852  hypothetical protein [KO:K01873] [EC:6.1.1.9]
CKR_3183  hypothetical protein [KO:K01869] [EC:6.1.1.4]
CKR_3315  hypothetical protein [KO:K01870] [EC:6.1.1.5]
CKR_0147  hypothetical protein [KO:K04567] [EC:6.1.1.6]
CKR_1439  hypothetical protein [KO:K01887] [EC:6.1.1.19]
CKR_0531  hypothetical protein [KO:K01881] [EC:6.1.1.15]
CKR_2767  hypothetical protein [KO:K01892] [EC:6.1.1.21]
CKR_2830  hypothetical protein [KO:K01889] [EC:6.1.1.20]
CKR_2829  hypothetical protein [KO:K01890] [EC:6.1.1.20]
CKR_3113  hypothetical protein [KO:K01866] [EC:6.1.1.1]
CKR_0680  hypothetical protein [KO:K01866] [EC:6.1.1.1]
CKR_0538  hypothetical protein [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ckr00250  Alanine, aspartate and glutamate metabolism
ckr00260  Glycine, serine and threonine metabolism
ckr00270  Cysteine and methionine metabolism
ckr00290  Valine, leucine and isoleucine biosynthesis
ckr00300  Lysine biosynthesis
ckr00330  Arginine and proline metabolism
ckr00340  Histidine metabolism
ckr00380  Tryptophan metabolism
ckr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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