KEGG   PATHWAY: cpot00040
Entry
cpot00040                   Pathway                                
Name
Pentose and glucuronate interconversions - Citrobacter portucalensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
cpot00040  Pentose and glucuronate interconversions
cpot00040

Module
cpot_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cpot00040]
cpot_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cpot00040]
Organism
Citrobacter portucalensis [GN:cpot]
Gene
FOB25_03825  putative acyl-CoA thioester hydrolase [KO:K01051] [EC:3.1.1.11]
FOB25_15965  cupin domain-containing protein [KO:K26933] [EC:4.2.99.25]
FOB25_15950  kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase [KO:K01815] [EC:5.3.1.17]
FOB25_15955  kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD [KO:K00065] [EC:1.1.1.127]
FOB25_01305  kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD [KO:K00065] [EC:1.1.1.127]
FOB25_14430  uxaC; glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
FOB25_07875  tagaturonate reductase [KO:K00041] [EC:1.1.1.58]
FOB25_00005  tagaturonate reductase [KO:K00041] [EC:1.1.1.58]
FOB25_14435  altronate dehydratase [KO:K01685] [EC:4.2.1.7]
FOB25_19320  uxuA; mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
FOB25_08040  uxuA; mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
FOB25_00155  rspA; starvation-sensing protein RspA [KO:K08323] [EC:4.2.1.8]
FOB25_08035  fructuronate reductase [KO:K00040] [EC:1.1.1.57]
FOB25_00145  mannitol dehydrogenase family protein [KO:K00040] [EC:1.1.1.57]
FOB25_20305  nucleotide sugar dehydrogenase [KO:K00012] [EC:1.1.1.22]
FOB25_20315  UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
FOB25_20230  galF; UTP--glucose-1-phosphate uridylyltransferase GalF [KO:K00963] [EC:2.7.7.9]
FOB25_22270  galU; UTP--glucose-1-phosphate uridylyltransferase GalU [KO:K00963] [EC:2.7.7.9]
FOB25_08835  ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase UlaD [KO:K03078] [EC:4.1.1.85]
FOB25_08830  L-ribulose-5-phosphate 3-epimerase [KO:K03079] [EC:5.1.3.22]
FOB25_08825  L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
FOB25_07345  araD; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
FOB25_13110  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
FOB25_07340  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
FOB25_07335  araB; ribulokinase [KO:K00853] [EC:2.7.1.16]
FOB25_12190  xylB; xylulokinase [KO:K00854] [EC:2.7.1.17]
FOB25_12185  xylA; xylose isomerase [KO:K01805] [EC:5.3.1.5]
FOB25_10480  rhaB; rhamnulokinase [KO:K00848] [EC:2.7.1.5]
FOB25_10490  rhaD; rhamnulose-1-phosphate aldolase [KO:K01629] [EC:4.1.2.19]
FOB25_09425  D-lyxose/D-mannose family sugar isomerase [KO:K09988] [EC:5.3.1.15]
FOB25_11820  D-lyxose/D-mannose family sugar isomerase [KO:K09988] [EC:5.3.1.15]
FOB25_01540  NAD(P)-dependent alcohol dehydrogenase [KO:K00008] [EC:1.1.1.14]
FOB25_10450  dihydrodipicolinate synthase family protein [KO:K22397] [EC:4.1.2.28]
FOB25_08095  aldehyde dehydrogenase (NADP(+)) [KO:K13877] [EC:1.2.1.26]
FOB25_17790  FGGY-family carbohydrate kinase [KO:K00875] [EC:2.7.1.47]
FOB25_16175  fucI; L-fucose isomerase [KO:K01818] [EC:5.3.1.25 5.3.1.3]
FOB25_16170  fucK; L-fuculokinase [KO:K00879] [EC:2.7.1.51]
FOB25_16190  fucA; L-fuculose-phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
cpot00010  Glycolysis / Gluconeogenesis
cpot00020  Citrate cycle (TCA cycle)
cpot00030  Pentose phosphate pathway
cpot00052  Galactose metabolism
cpot00053  Ascorbate and aldarate metabolism
cpot00500  Starch and sucrose metabolism
cpot00520  Amino sugar and nucleotide sugar metabolism
cpot00561  Glycerolipid metabolism
cpot00562  Inositol phosphate metabolism
cpot00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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