KEGG   PATHWAY: cps00630
Entry
cps00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Colwellia psychrerythraea
Class
Metabolism; Carbohydrate metabolism
Pathway map
cps00630  Glyoxylate and dicarboxylate metabolism
cps00630

Module
cps_M00012  Glyoxylate cycle [PATH:cps00630]
cps_M00621  Glycine cleavage system [PATH:cps00630]
Other DBs
GO: 0046487 0043648
Organism
Colwellia psychrerythraea [GN:cps]
Gene
CPS_1232  icl; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
CPS_3955  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
CPS_4874  putative malate synthase [KO:K01638] [EC:2.3.3.9]
CPS_1228  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
CPS_4514  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CPS_2214  gltA; citrate synthase I [KO:K01647] [EC:2.3.3.1]
CPS_4800  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
CPS_4802  putative aconitate hydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
CPS_1605  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CPS_2626  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CPS_4092  phbB2; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
CPS_2625  phbB1; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
CPS_3371  MaoC domain protein [KO:K17865] [EC:4.2.1.55]
CPS_2441  catalase [KO:K03781] [EC:1.11.1.6]
CPS_3328  putative catalase [KO:K03781] [EC:1.11.1.6]
CPS_2082  putative glyoxylate reductase [KO:K00015] [EC:1.1.1.26]
CPS_4284  D-isomer specific 2-hydroxyacid dehydrogenase family protein [KO:K00018] [EC:1.1.1.29]
CPS_2291  HAD-superfamily hydrolase, subfamily IA [KO:K01091] [EC:3.1.3.18]
CPS_0261  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
CPS_4878  aminotransferase, class V [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CPS_2190  aminotransferase, class V [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CPS_4677  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
CPS_0400  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
CPS_3844  glyA3; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CPS_4031  glyA4; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CPS_0728  glyA1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CPS_2477  glyA2; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CPS_3846  gcvP2; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
CPS_1276  gcvP1; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
CPS_3841  gcvT2; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
CPS_1274  gcvT1; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
CPS_0826  putative dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
CPS_4805  lpdA; pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
CPS_3845  gcvH2; glycine cleavage system H protein [KO:K02437]
CPS_1275  gcvH1; glycine cleavage system H protein [KO:K02437]
CPS_0521  conserved hypothetical protein [KO:K15918] [EC:2.7.1.31]
CPS_0509  conserved hypothetical protein [KO:K15918] [EC:2.7.1.31]
CPS_2284  eda; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CPS_2060  hypothetical protein [KO:K00126] [EC:1.17.1.9]
CPS_4026  hypothetical protein [KO:K00126] [EC:1.17.1.9]
CPS_2058  fdhA1; formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
CPS_4024  fdhA2; formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
CPS_2057  fdhB1; formate dehydrogenase, beta subunit [KO:K00124]
CPS_4023  fdhB2; formate dehydrogenase, beta subunit [KO:K00124]
CPS_2056  fdhG1; formate dehydrogenase, gamma subunit [KO:K00127]
CPS_4022  fdhG2; formate dehydrogenase, gamma subunit [KO:K00127]
CPS_3620  purU2; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
CPS_4036  purU3; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
CPS_4357  purU4; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
CPS_2482  purU1; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
CPS_4353  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cps00010  Glycolysis / Gluconeogenesis
cps00020  Citrate cycle (TCA cycle)
cps00030  Pentose phosphate pathway
cps00053  Ascorbate and aldarate metabolism
cps00071  Fatty acid degradation
cps00230  Purine metabolism
cps00250  Alanine, aspartate and glutamate metabolism
cps00260  Glycine, serine and threonine metabolism
cps00620  Pyruvate metabolism
cps00710  Carbon fixation by Calvin cycle
cps00750  Vitamin B6 metabolism
cps00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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