KEGG   PATHWAY: cthd00970
Entry
cthd00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Clostridium thermosuccinogenes
Class
Genetic Information Processing; Translation
Pathway map
cthd00970  Aminoacyl-tRNA biosynthesis
cthd00970

Organism
Clostridium thermosuccinogenes [GN:cthd]
Gene
CDO33_05055  tRNA-Ala [KO:K14218]
CDO33_04800  tRNA-Ala [KO:K14218]
CDO33_18405  tRNA-Arg [KO:K14219]
CDO33_19530  tRNA-Arg [KO:K14219]
CDO33_00075  tRNA-Arg [KO:K14219]
CDO33_16535  tRNA-Arg [KO:K14219]
CDO33_07505  tRNA-Asn [KO:K14220]
CDO33_08145  tRNA-Asn [KO:K14220]
CDO33_03125  tRNA-Asp [KO:K14221]
CDO33_10890  tRNA-Asp [KO:K14221]
CDO33_03140  tRNA-Cys [KO:K14222]
CDO33_16160  tRNA-Gln [KO:K14223]
CDO33_05555  tRNA-Gln [KO:K14223]
CDO33_00515  tRNA-Glu [KO:K14224]
CDO33_10895  tRNA-Glu [KO:K14224]
CDO33_16275  tRNA-Glu [KO:K14224]
CDO33_15235  tRNA-Gly [KO:K14225]
CDO33_01490  tRNA-Gly [KO:K14225]
CDO33_03135  tRNA-Gly [KO:K14225]
CDO33_15240  tRNA-Gly [KO:K14225]
CDO33_16540  tRNA-Gly [KO:K14225]
CDO33_16165  tRNA-His [KO:K14226]
CDO33_08130  tRNA-Ile [KO:K14227]
CDO33_17855  tRNA-Ile [KO:K14227]
CDO33_19850  tRNA-Ile [KO:K14227]
CDO33_00335  tRNA-Leu [KO:K14228]
CDO33_07865  tRNA-Leu [KO:K14228]
CDO33_08075  tRNA-Leu [KO:K14228]
CDO33_10310  tRNA-Leu [KO:K14228]
CDO33_07100  tRNA-Lys [KO:K14229]
CDO33_09140  tRNA-Lys [KO:K14229]
CDO33_05245  tRNA-Lys [KO:K14229]
CDO33_16155  tRNA-Lys [KO:K14229]
CDO33_00340  tRNA-Met [KO:K14230]
CDO33_00510  tRNA-Met [KO:K14230]
CDO33_07305  tRNA-Met [KO:K14230]
CDO33_07510  tRNA-Met [KO:K14230]
CDO33_03130  tRNA-Phe [KO:K14231]
CDO33_07300  tRNA-Phe [KO:K14231]
CDO33_19100  tRNA-Pro [KO:K14232]
CDO33_14900  tRNA-Pro [KO:K14232]
CDO33_07055  tRNA-Pro [KO:K14232]
CDO33_19715  tRNA-Ser [KO:K14233]
CDO33_19410  tRNA-Ser [KO:K14233]
CDO33_00065  tRNA-Ser [KO:K14233]
CDO33_08080  tRNA-Thr [KO:K14234]
CDO33_18985  tRNA-Thr [KO:K14234]
CDO33_04570  tRNA-Thr [KO:K14234]
CDO33_01495  tRNA-Thr [KO:K14234]
CDO33_07105  tRNA-Trp [KO:K14235]
CDO33_07295  tRNA-Tyr [KO:K14236]
CDO33_08085  tRNA-Tyr [KO:K14236]
CDO33_10470  tRNA-Val [KO:K14237]
CDO33_00520  tRNA-Val [KO:K14237]
CDO33_03120  tRNA-Val [KO:K14237]
CDO33_19000  tRNA-Val [KO:K14237]
CDO33_05050  tRNA-Val [KO:K14237]
CDO33_15250  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CDO33_00500  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CDO33_00495  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CDO33_00505  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CDO33_15245  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
CDO33_09410  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
CDO33_05375  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CDO33_00490  aspartate--tRNA(Asn) ligase [KO:K09759] [EC:6.1.1.23]
CDO33_14230  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
CDO33_05510  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
CDO33_18620  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CDO33_14455  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CDO33_05560  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CDO33_01470  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CDO33_01020  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CDO33_06440  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CDO33_06475  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CDO33_04975  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CDO33_16175  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CDO33_06085  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CDO33_00120  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CDO33_06905  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
CDO33_17890  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CDO33_13090  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CDO33_09375  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CDO33_03480  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CDO33_03485  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CDO33_05370  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CDO33_10335  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
CDO33_10330  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
CDO33_04460  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CDO33_03325  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cthd00250  Alanine, aspartate and glutamate metabolism
cthd00260  Glycine, serine and threonine metabolism
cthd00270  Cysteine and methionine metabolism
cthd00290  Valine, leucine and isoleucine biosynthesis
cthd00300  Lysine biosynthesis
cthd00330  Arginine and proline metabolism
cthd00340  Histidine metabolism
cthd00380  Tryptophan metabolism
cthd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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