KEGG   PATHWAY: cvg00630
Entry
cvg00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cyprinodon variegatus (sheepshead minnow)
Class
Metabolism; Carbohydrate metabolism
Pathway map
cvg00630  Glyoxylate and dicarboxylate metabolism
cvg00630

Module
cvg_M00621  Glycine cleavage system [PATH:cvg00630]
cvg_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:cvg00630]
Other DBs
GO: 0046487 0043648
Organism
Cyprinodon variegatus (sheepshead minnow) [GN:cvg]
Gene
107096777  acss2; acetyl-coenzyme A synthetase, cytoplasmic isoform X1 [KO:K01895] [EC:6.2.1.1]
107083643  acss1; acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
107089440  acetyl-coenzyme A synthetase, cytoplasmic-like isoform X1 [KO:K01895] [EC:6.2.1.1]
107088625  malate dehydrogenase, cytoplasmic isoform X1 [KO:K00025] [EC:1.1.1.37]
107094037  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107089625  mdh2; malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
107088749  cs; citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
107091043  aconitate hydratase, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
107099778  aco1; cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
107093103  aconitate hydratase, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
107081647  acat2; acetyl-CoA acetyltransferase, cytosolic [KO:K00626] [EC:2.3.1.9]
107091366  acat1; acetyl-CoA acetyltransferase, mitochondrial [KO:K00626] [EC:2.3.1.9]
107091356  mcee; methylmalonyl-CoA epimerase, mitochondrial [KO:K05606] [EC:5.1.99.1]
107099023  pcca; propionyl-CoA carboxylase alpha chain, mitochondrial [KO:K01965] [EC:6.4.1.3]
107085097  pccb; propionyl-CoA carboxylase beta chain, mitochondrial [KO:K01966] [EC:6.4.1.3 2.1.3.15]
107097897  mut; methylmalonyl-CoA mutase, mitochondrial [KO:K01847] [EC:5.4.99.2]
107100327  hao1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
107097767  hao2; hydroxyacid oxidase 2 isoform X1 [KO:K11517] [EC:1.1.3.15]
107093610  cat; catalase [KO:K03781] [EC:1.11.1.6]
107085712  glyoxylate reductase/hydroxypyruvate reductase-like [KO:K00049] [EC:1.1.1.79 1.1.1.81]
107088233  glyoxylate reductase/hydroxypyruvate reductase-like [KO:K00049] [EC:1.1.1.79 1.1.1.81]
107086231  pgp; phosphoglycolate phosphatase [KO:K19269] [EC:3.1.3.18 3.1.3.48]
107082426  serine--pyruvate aminotransferase, mitochondrial-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
107083359  agxt; serine--pyruvate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
107103267  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107091548  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107083392  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
107086694  serine hydroxymethyltransferase, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
107103250  shmt2; serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
107104201  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
107104202  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
107104203  serine hydroxymethyltransferase, cytosolic-like isoform X1 [KO:K00600] [EC:2.1.2.1]
107085199  gldc; glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
107098941  amt; aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
107083227  dld; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
107090538  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
107090188  gcsh; glycine cleavage system H protein, mitochondrial [KO:K02437]
107098437  hyi; putative hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
107089335  glyctk; glycerate kinase [KO:K11529] [EC:2.7.1.165]
107081958  hoga1; 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [KO:K18123] [EC:4.1.3.16]
107090761  afmid; kynurenine formamidase isoform X1 [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cvg00010  Glycolysis / Gluconeogenesis
cvg00020  Citrate cycle (TCA cycle)
cvg00030  Pentose phosphate pathway
cvg00053  Ascorbate and aldarate metabolism
cvg00071  Fatty acid degradation
cvg00230  Purine metabolism
cvg00250  Alanine, aspartate and glutamate metabolism
cvg00260  Glycine, serine and threonine metabolism
cvg00620  Pyruvate metabolism
cvg00750  Vitamin B6 metabolism
cvg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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