KEGG   PATHWAY: ddr00010
Entry
ddr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Deinococcus deserti
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ddr00010  Glycolysis / Gluconeogenesis
ddr00010

Module
ddr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ddr00010]
ddr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ddr00010]
ddr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ddr00010]
ddr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ddr00010]
Other DBs
GO: 0006096 0006094
Organism
Deinococcus deserti [GN:ddr]
Gene
Deide_01030  putative Glucokinase (Glucose kinase) [KO:K25026] [EC:2.7.1.2]
Deide_17080  pgi; putative glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Deide_14610  pfkA; putative 6-phosphofructokinase (Phosphofructokinase I) (Phosphohexokinase) [KO:K00850] [EC:2.7.1.11]
Deide_07360  glpX; putative Fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
Deide_22060  fba; putative fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Deide_11390  putative triose-phosphate isomerase (phosphotriose isomerase) [KO:K01803] [EC:5.3.1.1]
Deide_11420  putative glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [KO:K00134] [EC:1.2.1.12]
Deide_11410  putative phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Deide_22540  putative Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Deide_07270  hypothetical protein [KO:K01834] [EC:5.4.2.11]
Deide_22650  apgM; putative Phosphoglycerate mutase (Phosphoglycerate phosphomutase) (Phosphoglyceromutase) (PGAM) [KO:K15635] [EC:5.4.2.12]
Deide_00030  putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) [KO:K01689] [EC:4.2.1.11]
Deide_00040  pyk; putative Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Deide_17060  ppsA; putative pyruvate water dikinase (Phosphoenolpyruvate synthase) [KO:K01007] [EC:2.7.9.2]
Deide_03160  aceE; putative Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
Deide_03910  putative Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
Deide_03900  pdhB; putative Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
Deide_03170  aceF; putative Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) [KO:K00627] [EC:2.3.1.12]
Deide_20540  putative dihydrolipoyl dehydrogenase (E3 component of alpha-ketoacid dehydrogenase complexes) [KO:K00382] [EC:1.8.1.4]
Deide_22710  putative dihydrolipoyl dehydrogenase (E3 component of alpha-ketoacid dehydrogenase complexes) [KO:K00382] [EC:1.8.1.4]
Deide_22290  ldh; putative L-lactate dehydrogenase, precursor (L-lactic acid dehydrogenase) [KO:K00016] [EC:1.1.1.27]
Deide_03550  adh; putative Alcohol dehydrogenase (ADH) [KO:K00001] [EC:1.1.1.1]
Deide_21140  putative NAD-dependent aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Deide_2p00500  putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Deide_23060  acsA; putative acetate--CoA ligase (Acyl-activating enzyme, Acetyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
Deide_05990  acsA; putative acetate--CoA ligase (Acyl-activating enzyme, Acetyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
Deide_2p02210  galM; putative aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Deide_04840  putative aldose 1-epimerase (aldose mutarotase) [KO:K01785] [EC:5.1.3.3]
Deide_12000  putative haloacid dehalogenase-like hydrolase (HAD superfamily hydrolase) [KO:K20866] [EC:3.1.3.10]
Deide_07380  putative phosphoglucomutase (Glucose phosphomutase) [KO:K01835] [EC:5.4.2.2]
Deide_06630  ppgK; putative polyphosphate--glucose phosphotransferase [KO:K00886] [EC:2.7.1.63]
Deide_12330  pckA; putative Phosphoenolpyruvate carboxykinase (ATP) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ddr00020  Citrate cycle (TCA cycle)
ddr00030  Pentose phosphate pathway
ddr00500  Starch and sucrose metabolism
ddr00620  Pyruvate metabolism
ddr00640  Propanoate metabolism
ddr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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