KEGG   PATHWAY: dgi00010
Entry
dgi00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulfoscipio gibsoniae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dgi00010  Glycolysis / Gluconeogenesis
dgi00010

Module
dgi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dgi00010]
dgi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dgi00010]
dgi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dgi00010]
Other DBs
GO: 0006096 0006094
Organism
Desulfoscipio gibsoniae [GN:dgi]
Gene
Desgi_2644  hexokinase [KO:K00844] [EC:2.7.1.1]
Desgi_4308  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Desgi_2440  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Desgi_1989  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Desgi_0585  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Desgi_4631  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Desgi_4298  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Desgi_3338  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Desgi_4300  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Desgi_4299  3-phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Desgi_4297  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Desgi_2525  putative homoserine kinase [KO:K15635] [EC:5.4.2.12]
Desgi_4296  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Desgi_2439  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Desgi_1368  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Desgi_2406  phosphoenolpyruvate synthase/pyruvate phosphate dikinase [KO:K01007] [EC:2.7.9.2]
Desgi_2407  phosphoenolpyruvate synthase/pyruvate phosphate dikinase [KO:K01007] [EC:2.7.9.2]
Desgi_4178  alkylhydroperoxidase AhpD family core domain protein [KO:K00627] [EC:2.3.1.12]
Desgi_1127  2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
Desgi_1125  2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family [KO:K00172] [EC:1.2.7.1]
Desgi_2587  2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Desgi_3043  2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Desgi_0085  2-oxoacid:ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Desgi_0086  2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desgi_2586  2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desgi_2095  2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desgi_3042  2-oxoacid:ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Desgi_0898  alcohol dehydrogenase, class IV [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Desgi_1496  alcohol dehydrogenase, class IV [KO:K13954] [EC:1.1.1.1]
Desgi_3037  alcohol dehydrogenase, class IV [KO:K13954] [EC:1.1.1.1]
Desgi_2828  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Desgi_2695  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Desgi_2132  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Desgi_3200  acyl-CoA synthetase (NDP forming) [KO:K24012] [EC:6.2.1.13]
Desgi_3353  ADP-forming acetyl coenzyme A synthetase [KO:K24012] [EC:6.2.1.13]
Desgi_2113  acyl-CoA synthetase (NDP forming) [KO:K24012] [EC:6.2.1.13]
Desgi_1560  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Desgi_2333  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dgi00020  Citrate cycle (TCA cycle)
dgi00030  Pentose phosphate pathway
dgi00500  Starch and sucrose metabolism
dgi00620  Pyruvate metabolism
dgi00640  Propanoate metabolism
dgi00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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