KEGG   PATHWAY: dosa00620
Entry
dosa00620                   Pathway                                
Name
Pyruvate metabolism - Oryza sativa japonica (Japanese rice) (RAPDB)
Class
Metabolism; Carbohydrate metabolism
Pathway map
dosa00620  Pyruvate metabolism
dosa00620

Module
dosa_M00168  CAM (Crassulacean acid metabolism), dark [PATH:dosa00620]
dosa_M00169  CAM (Crassulacean acid metabolism), light [PATH:dosa00620]
dosa_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:dosa00620]
dosa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dosa00620]
Other DBs
GO: 0006090
Organism
Oryza sativa japonica (Japanese rice) (RAPDB) [GN:dosa]
Gene
Os02t0525900-01  (RAP-DB) Os02g0525900; Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). [KO:K01895] [EC:6.2.1.1]
Os04t0404800-01  (RAP-DB) Os04g0404800; Similar to H0502B11.5 protein. [KO:K01895] [EC:6.2.1.1]
Os03t0305000-01  (RAP-DB) Os03g0305000; AMP-binding protein. [KO:K01913] [EC:6.2.1.1 6.2.1.2]
Os03t0305100-01  (RAP-DB) Os03g0305100; Similar to AMP-binding protein. [KO:K01913] [EC:6.2.1.1 6.2.1.2]
Os04t0119400-01  (RAP-DB) Os04g0119400; Similar to Pyruvate dehydrogenase E1 component, alpha subunit. [KO:K00161] [EC:1.2.4.1]
Os02t0739600-01  (RAP-DB) Os02g0739600; Similar to Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A). [KO:K00161] [EC:1.2.4.1]
Os06t0246500-01  (RAP-DB) Os06g0246500; Similar to Pyruvate dehydrogenase E1 alpha subunit (EC 1.2.4.1). [KO:K00161] [EC:1.2.4.1]
Os09t0509200-01  (RAP-DB) Os09g0509200; Similar to Pyruvate dehydrogenase E1 beta subunit isoform 3 (EC 1.2.4.1). [KO:K00162] [EC:1.2.4.1]
Os03t0645100-01  (RAP-DB) Os03g0645100; Similar to pyruvate dehydrogenase E1 component subunit beta. [KO:K00162] [EC:1.2.4.1]
Os08t0536000-01  (RAP-DB) Os08g0536000; Similar to Pyruvate dehydrogenase E1 beta subunit isoform 1 (EC 1.2.4.1). [KO:K00162] [EC:1.2.4.1]
Os12t0616900-01  (RAP-DB) Os12g0616900; Similar to Pyruvate dehydrogenase E1 beta subunit (Fragment). [KO:K00162] [EC:1.2.4.1]
Os06t0499900-01  (RAP-DB) Os06g0499900; Similar to Dihydrolipoamide acetyltransferase (E2) subunit of PDC (Fragment). [KO:K00627] [EC:2.3.1.12]
Os07t0410100-01  (RAP-DB) Os07g0410100; Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). [KO:K00627] [EC:2.3.1.12]
Os12t0182200-01  (RAP-DB) Os12g0182200; Similar to Dihydrolipoamide S-acetyltransferase. [KO:K00627] [EC:2.3.1.12]
Os09t0408600-01  (RAP-DB) Os09g0408600; Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). [KO:K00627] [EC:2.3.1.12]
Os02t0105200-01  (RAP-DB) Os02g0105200; Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12). [KO:K00627] [EC:2.3.1.12]
Os06t0105400-01  (RAP-DB) Os06g0105400; Similar to dihydrolipoamide S-acetyltransferase. [KO:K00627] [EC:2.3.1.12]
Os08t0431300-01  (RAP-DB) Os08g0431300; Similar to Dihydrolipoamide S-acetyltransferase. [KO:K00627] [EC:2.3.1.12]
Os01t0337900-01  (RAP-DB) Os01g0337900; Similar to Dihydrolipoamide dehydrogenase. [KO:K00382] [EC:1.8.1.4]
Os01t0328700-01  (RAP-DB) Os01g0328700; FAD-dependent pyridine nucleotide-disulphide oxidoreductase domain containing protein. [KO:K00382] [EC:1.8.1.4]
Os05t0156700-01  (RAP-DB) Os05g0156700; Similar to Dihydrolipoyl dehydrogenase. [KO:K00382] [EC:1.8.1.4]
Os02t0637700-01  (RAP-DB) Os02g0637700; Similar to Alcohol dehydrogenase-like protein. [KO:K00001] [EC:1.1.1.1]
Os10t0159800-01  (RAP-DB) Os10g0159800; Alcohol dehydrogenase superfamily, zinc-containing protein. [KO:K00001] [EC:1.1.1.1]
Os11t0210600-01  (RAP-DB) Os11g0210600; Similar to Alcohol dehydrogenase (Fragment). [KO:K00001] [EC:1.1.1.1]
Os02t0815500-01  (RAP-DB) Os02g0815500; Alcohol dehydrogenase class III (EC 1.1.1.1) (Glutathione-dependent formaldehyde dehydrogenase) (EC 1.2.1.1) (FDH) (FALDH) (GSH-FDH). [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Os03t0189400-01  (RAP-DB) Os03g0189400; Similar to Alcohol dehydrogenase ADH. [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Os03t0189600-01  (RAP-DB) Os03g0189600; Similar to Alcohol dehydrogenase. [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Os07t0621800-01  (RAP-DB) Os07g0621800; Alcohol dehydrogenase superfamily, zinc-containing protein. [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Os11t0210300-01  (RAP-DB) Os11g0210300; Alcohol dehydrogenase 1. [KO:K18857] [EC:1.1.1.1]
Os11t0210500-01  (RAP-DB) Os11g0210500; Similar to Alcohol dehydrogenase. [KO:K18857] [EC:1.1.1.1]
Os05t0456300-01  (RAP-DB) Os05g0456300; Aldose reductase. [KO:K00002] [EC:1.1.1.2]
Os05t0456200-00  (RAP-DB) Os05g0456200; Similar to Aldose reductase. [KO:K00002] [EC:1.1.1.2]
Os05t0474600-01  (RAP-DB) Os05g0474600; Similar to Aldose reductase-related protein (EC 1.1.1.21). [KO:K00002] [EC:1.1.1.2]
Os01t0847600-01  (RAP-DB) Os01g0847600; Aldo/keto reductase family protein. [KO:K00002] [EC:1.1.1.2]
Os01t0847700-01  (RAP-DB) Os01g0847700; Similar to Aldose reductase. [KO:K00002] [EC:1.1.1.2]
Os12t0145700-01  (RAP-DB) Os12g0145700; Pyruvate kinase family protein. [KO:K00873] [EC:2.7.1.40]
Os03t0672300-01  (RAP-DB) Os03g0672300; Similar to Pyruvate kinase. [KO:K00873] [EC:2.7.1.40]
Os04t0677500-01  (RAP-DB) Os04g0677500; Pyruvate kinase (EC 2.7.1.40). [KO:K00873] [EC:2.7.1.40]
Os01t0660300-01  (RAP-DB) Os01g0660300; Similar to Pyruvate kinase. [KO:K00873] [EC:2.7.1.40]
Os07t0181000-01  (RAP-DB) Os07g0181000; Similar to Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40). [KO:K00873] [EC:2.7.1.40]
Os11t0148500-02  (RAP-DB) Os11g0148500; Pyruvate kinase family protein. [KO:K00873] [EC:2.7.1.40]
Os01t0276700-01  (RAP-DB) Os01g0276700; Similar to Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK). [KO:K00873] [EC:2.7.1.40]
Os10t0571200-01  (RAP-DB) Os10g0571200; Similar to Pyruvate kinase isozyme G, chloroplast (EC 2.7.1.40) (Fragment). [KO:K00873] [EC:2.7.1.40]
Os11t0216000-01  (RAP-DB) Os11g0216000; Pyruvate kinase family protein. [KO:K00873] [EC:2.7.1.40]
Os03t0325000-00  (RAP-DB) Os03g0325000; Similar to Pyruvate kinase. [KO:K00873] [EC:2.7.1.40]
Os06t0264700-01  (RAP-DB) Os06g0264700; Acylphosphatase domain containing protein. [KO:K01512] [EC:3.6.1.7]
Os06t0270900-01  (RAP-DB) Os06g0270900; Similar to RF2 (EC 1.2.1.3) (T cytoplasm male sterility restorer factor 2). [KO:K00128] [EC:1.2.1.3]
Os02t0646500-01  (RAP-DB) Os02g0646500; Aldehyde dehydrogenase domain containing protein. [KO:K00128] [EC:1.2.1.3]
Os02t0647900-01  (RAP-DB) Os02g0647900; Similar to Fatty aldehyde dehydrogenase 1. [KO:K00128] [EC:1.2.1.3]
Os04t0540600-01  (RAP-DB) Os04g0540600; Aldehyde dehydrogenase domain containing protein. [KO:K00128] [EC:1.2.1.3]
Os11t0186200-01  (RAP-DB) Os11g0186200; Similar to Aldehyde dehydrogenase (EC 1.2.1.3). [KO:K00128] [EC:1.2.1.3]
Os12t0178000-01  (RAP-DB) Os12g0178000; Similar to Aldehyde dehydrogenase family protein, expressed. [KO:K00128] [EC:1.2.1.3]
Os09t0440300-01  (RAP-DB) Os09g0440300; Similar to Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin 1) (Matured fruit 60 kDa protein) (MF-60). [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
Os02t0105400-01  (RAP-DB) Os02g0105400; Similar to L-lactate dehydrogenase A (EC 1.1.1.27) (LDH-A). [KO:K00016] [EC:1.1.1.27]
Os06t0104900-01  (RAP-DB) Os06g0104900; Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment). [KO:K00016] [EC:1.1.1.27]
Os07t0163000-01  (RAP-DB) Os07g0163000; Similar to FAD linked oxidase family protein. [KO:K00102] [EC:1.1.2.4]
Os05t0295800-01  (RAP-DB) Os05g0295800; Similar to Glyoxalase I (EC 4.4.1.5). [KO:K01759] [EC:4.4.1.5]
Os08t0191700-01  (RAP-DB) Os08g0191700; Similar to Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D- lactoylglutathione methylglyoxal lyase). [KO:K01759] [EC:4.4.1.5]
Os05t0230900-01  (RAP-DB) Os05g0230900; Similar to Glyoxalase I. [KO:K01759] [EC:4.4.1.5]
Os03t0332400-01  (RAP-DB) Os03g0332400; Similar to Hydroxyacylglutathione hydrolase cytoplasmic (EC 3.1.2.6) (Glyoxalase II) (Glx II). [KO:K01069] [EC:3.1.2.6]
Os09t0516600-01  (RAP-DB) Os09g0516600; Glyoxalase II. [KO:K01069] [EC:3.1.2.6]
Os11t0591550-00  (RAP-DB) Os11g0591550; ThiJ/PfpI domain containing protein. [KO:K18881] [EC:4.2.1.130]
Os04t0671700-01  (RAP-DB) Os04g0671700; ThiJ/PfpI domain containing protein. [KO:K18881] [EC:4.2.1.130]
Os07t0496200-01  (RAP-DB) Os07g0496200; Similar to NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME). [KO:K00028] [EC:1.1.1.39]
Os10t0503500-01  (RAP-DB) Os10g0503500; Similar to NAD-dependent malic enzyme 59 kDa isoform, mitochondrial precursor (EC 1.1.1.39) (NAD-ME). [KO:K00028] [EC:1.1.1.39]
Os01t0188400-01  (RAP-DB) Os01g0188400; NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME). [KO:K00029] [EC:1.1.1.40]
Os05t0186300-01  (RAP-DB) Os05g0186300; Similar to NADP-malic enzyme. [KO:K00029] [EC:1.1.1.40]
Os01t0743500-01  (RAP-DB) Os01g0743500; Cytosolic NADP malic enzyme. [KO:K00029] [EC:1.1.1.40]
Os01t0723400-01  (RAP-DB) Os01g0723400; Malic oxidoreductase family protein. [KO:K00029] [EC:1.1.1.40]
Os04t0551200-01  (RAP-DB) Os04g0551200; Similar to Cytoplasmic malate dehydrogenase. [KO:K00025] [EC:1.1.1.37]
Os10t0478200-01  (RAP-DB) Os10g0478200; Cytoplasmic malate dehydrogenase. [KO:K00025] [EC:1.1.1.37]
Os07t0630800-01  (RAP-DB) Os07g0630800; Similar to Nodule-enhanced malate dehydrogenase. [KO:K00026] [EC:1.1.1.37]
Os08t0434300-01  (RAP-DB) Os08g0434300; Similar to Malate dehydrogenase precursor (EC 1.1.1.37). [KO:K00026] [EC:1.1.1.37]
Os05t0574400-01  (RAP-DB) Os05g0574400; Similar to Malate dehydrogenase. [KO:K00026] [EC:1.1.1.37]
Os03t0773800-01  (RAP-DB) Os03g0773800; Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH). [KO:K00026] [EC:1.1.1.37]
Os01t0649100-01  (RAP-DB) Os01g0649100; Malate dehydrogenase. [KO:K00026] [EC:1.1.1.37]
Os01t0829800-01  (RAP-DB) Os01g0829800; Similar to Malate dehydrogenase precursor (EC 1.1.1.37). [KO:K00026] [EC:1.1.1.37]
Os12t0632700-01  (RAP-DB) Os12g0632700; Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37). [KO:K00026] [EC:1.1.1.37]
Os08t0562100-01  (RAP-DB) Os08g0562100; Similar to Sorghum chloroplast CM3 malate dehydrogenase (NADP) (Fragment). [KO:K00051] [EC:1.1.1.82]
Os03t0337900-01  (RAP-DB) Os03g0337900; Similar to predicted protein. [KO:K01679] [EC:4.2.1.2]
Os08t0366000-01  (RAP-DB) Os08g0366000; Phosphoenolpyruvate carboxylase. [KO:K01595] [EC:4.1.1.31]
Os02t0244700-01  (RAP-DB) Os02g0244700; Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). [KO:K01595] [EC:4.1.1.31]
Os01t0208700-01  (RAP-DB) Os01g0208700; Similar to Phosphoenolpyruvate carboxylase (Fragment). [KO:K01595] [EC:4.1.1.31]
Os01t0110700-01  (RAP-DB) Os01g0110700; Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31). [KO:K01595] [EC:4.1.1.31]
Os01t0758300-01  (RAP-DB) Os01g0758300; Similar to Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase). [KO:K01595] [EC:4.1.1.31]
Os09t0315700-01  (RAP-DB) Os09g0315700; Phosphoenolpyruvate carboxylase family protein. [KO:K01595] [EC:4.1.1.31]
Os03t0255500-01  (RAP-DB) Os03g0255500; Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment). [KO:K01610] [EC:4.1.1.49]
Os10t0204400-01  (RAP-DB) Os10g0204400; Similar to Phosphoenolpyruvate carboxykinase (Fragment). [KO:K01610] [EC:4.1.1.49]
Os05t0405000-01  (RAP-DB) Os05g0405000; Orthophosphate dikinase precursor (EC 2.7.9.1). [KO:K01006] [EC:2.7.9.1]
Os04t0486950-01  (RAP-DB) Os04g0486950; Similar to Malate synthase. [KO:K01638] [EC:2.3.3.9]
Os09t0252100-01  (RAP-DB) Os09g0252100; Similar to Acetyl-CoA C-acetyltransferase. [KO:K00626] [EC:2.3.1.9]
Os01t0110400-01  (RAP-DB) Os01g0110400; Similar to Acetyl-CoA C-acetyltransferase. [KO:K00626] [EC:2.3.1.9]
Os11t0142500-00  (RAP-DB) Os11g0142500; Similar to 2-isopropylmalate synthase B. [KO:K01649] [EC:2.3.3.13]
Os12t0138900-01  (RAP-DB) Os12g0138900; Similar to Plastid isopropylmalate synthase (Fragment). [KO:K01649] [EC:2.3.3.13]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00033  Acetate
C00036  Oxaloacetate
C00042  Succinate
C00058  Formate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00083  Malonyl-CoA
C00084  Acetaldehyde
C00122  Fumarate
C00149  (S)-Malate
C00186  (S)-Lactate
C00227  Acetyl phosphate
C00256  (R)-Lactate
C00332  Acetoacetyl-CoA
C00424  (S)-Lactaldehyde
C00469  Ethanol
C00546  Methylglyoxal
C00937  (R)-Lactaldehyde
C01251  (R)-2-Hydroxybutane-1,2,4-tricarboxylate
C02488  (R)-2-Ethylmalate
C02504  alpha-Isopropylmalate
C03248  Acetylenedicarboxylate
C03451  (R)-S-Lactoylglutathione
C03981  2-Hydroxyethylenedicarboxylate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05993  Acetyl adenylate
C05994  2-Propylmalate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Related
pathway
dosa00010  Glycolysis / Gluconeogenesis
dosa00020  Citrate cycle (TCA cycle)
dosa00061  Fatty acid biosynthesis
dosa00250  Alanine, aspartate and glutamate metabolism
dosa00260  Glycine, serine and threonine metabolism
dosa00290  Valine, leucine and isoleucine biosynthesis
dosa00300  Lysine biosynthesis
dosa00630  Glyoxylate and dicarboxylate metabolism
dosa00640  Propanoate metabolism
dosa00650  Butanoate metabolism
dosa00760  Nicotinate and nicotinamide metabolism
KO pathway
ko00620   
LinkDB

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