KEGG   PATHWAY: dpd00010
Entry
dpd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Deinococcus peraridilitoris
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dpd00010  Glycolysis / Gluconeogenesis
dpd00010

Module
dpd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dpd00010]
dpd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dpd00010]
dpd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dpd00010]
dpd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dpd00010]
Other DBs
GO: 0006096 0006094
Organism
Deinococcus peraridilitoris [GN:dpd]
Gene
Deipe_1327  transcriptional regulator/sugar kinase [KO:K25026] [EC:2.7.1.2]
Deipe_0046  transcriptional regulator/sugar kinase [KO:K25026] [EC:2.7.1.2]
Deipe_0315  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Deipe_1876  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Deipe_0700  1-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Deipe_3103  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Deipe_1865  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Deipe_3691  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Deipe_3693  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Deipe_3692  3-phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Deipe_1729  fructose-2,6-bisphosphatase [KO:K01834] [EC:5.4.2.11]
Deipe_2293  fructose-2,6-bisphosphatase [KO:K01834] [EC:5.4.2.11]
Deipe_2448  fructose-2,6-bisphosphatase [KO:K01834] [EC:5.4.2.11]
Deipe_1128  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
Deipe_1942  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Deipe_1943  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Deipe_2893  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Deipe_2774  pyruvate dehydrogenase E1 component, homodimeric type [KO:K00163] [EC:1.2.4.1]
Deipe_0855  pyruvate dehydrogenase E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
Deipe_0857  pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit [KO:K00162] [EC:1.2.4.1]
Deipe_2773  pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component [KO:K00627] [EC:2.3.1.12]
Deipe_0915  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Deipe_1175  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Deipe_0947  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Deipe_1345  galactose mutarotase-like enzyme [KO:K01785] [EC:5.1.3.3]
Deipe_2769  galactose mutarotase-like enzyme [KO:K01785] [EC:5.1.3.3]
Deipe_0732  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Deipe_0954  transcriptional regulator/sugar kinase [KO:K00886] [EC:2.7.1.63]
Deipe_3745  ATP-dependent phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dpd00020  Citrate cycle (TCA cycle)
dpd00030  Pentose phosphate pathway
dpd00500  Starch and sucrose metabolism
dpd00620  Pyruvate metabolism
dpd00640  Propanoate metabolism
dpd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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