KEGG   PATHWAY: ebd00970
Entry
ebd00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Escherichia coli BL21-Gold(DE3)pLysS AG
Class
Genetic Information Processing; Translation
Pathway map
ebd00970  Aminoacyl-tRNA biosynthesis
ebd00970

Organism
Escherichia coli BL21-Gold(DE3)pLysS AG [GN:ebd]
Gene
ECBD_R0034  tRNA-Ala [KO:K14218]
ECBD_R0035  tRNA-Ala [KO:K14218]
ECBD_R0005  tRNA-Ala [KO:K14218]
ECBD_R0075  tRNA-Ala [KO:K14218]
ECBD_R0100  tRNA-Ala [KO:K14218]
ECBD_R0067  tRNA-Arg [KO:K14219]
ECBD_R0106  tRNA-Arg [KO:K14219]
ECBD_R0036  tRNA-Arg [KO:K14219]
ECBD_R0021  tRNA-Arg [KO:K14219]
ECBD_R0024  tRNA-Arg [KO:K14219]
ECBD_R0022  tRNA-Arg [KO:K14219]
ECBD_R0023  tRNA-Arg [KO:K14219]
ECBD_R0038  tRNA-Asn [KO:K14220]
ECBD_R0039  tRNA-Asn [KO:K14220]
ECBD_R0040  tRNA-Asn [KO:K14220]
ECBD_R0041  tRNA-Asn [KO:K14220]
ECBD_R0071  tRNA-Asp [KO:K14221]
ECBD_R0072  tRNA-Asp [KO:K14221]
ECBD_R0108  tRNA-Asp [KO:K14221]
ECBD_R0044  tRNA-Cys [KO:K14222]
ECBD_R0065  tRNA-Gln [KO:K14223]
ECBD_R0066  tRNA-Gln [KO:K14223]
ECBD_R0062  tRNA-Gln [KO:K14223]
ECBD_R0063  tRNA-Gln [KO:K14223]
ECBD_R0027  tRNA-Glu [KO:K14224]
ECBD_R0088  tRNA-Glu [KO:K14224]
ECBD_R0111  tRNA-Glu [KO:K14224]
ECBD_R0096  tRNA-Glu [KO:K14224]
ECBD_R0091  tRNA-Gly [KO:K14225]
ECBD_R0016  tRNA-Gly [KO:K14225]
ECBD_R0043  tRNA-Gly [KO:K14225]
ECBD_R0083  tRNA-Gly [KO:K14225]
ECBD_R0082  tRNA-Gly [KO:K14225]
ECBD_R0084  tRNA-Gly [KO:K14225]
ECBD_R0105  tRNA-His [KO:K14226]
ECBD_R0004  tRNA-Ile [KO:K14227]
ECBD_R0101  tRNA-Ile [KO:K14227]
ECBD_R0076  tRNA-Ile [KO:K14227]
ECBD_R0081  tRNA-Leu [KO:K14228]
ECBD_R0010  tRNA-Leu [KO:K14228]
ECBD_R0061  tRNA-Leu [KO:K14228]
ECBD_R0078  tRNA-Leu [KO:K14228]
ECBD_R0104  tRNA-Leu [KO:K14228]
ECBD_R0080  tRNA-Leu [KO:K14228]
ECBD_R0079  tRNA-Leu [KO:K14228]
ECBD_R0045  tRNA-Leu [KO:K14228]
ECBD_R0030  tRNA-Lys [KO:K14229]
ECBD_R0055  tRNA-Lys [KO:K14229]
ECBD_R0059  tRNA-Lys [KO:K14229]
ECBD_R0057  tRNA-Lys [KO:K14229]
ECBD_R0053  tRNA-Lys [KO:K14229]
ECBD_R0054  tRNA-Lys [KO:K14229]
ECBD_R0060  tRNA-Met [KO:K14230]
ECBD_R0064  tRNA-Met [KO:K14230]
ECBD_R0013  tRNA-Met [KO:K14230]
ECBD_R0011  tRNA-Met [KO:K14230]
ECBD_R0017  tRNA-Met [KO:K14230]
ECBD_R0018  tRNA-Met [KO:K14230]
ECBD_R0019  tRNA-Met [KO:K14230]
ECBD_R0014  tRNA-Phe [KO:K14231]
ECBD_R0085  tRNA-Phe [KO:K14231]
ECBD_R0002  tRNA-Pro [KO:K14232]
ECBD_R0037  tRNA-Pro [KO:K14232]
ECBD_R0103  tRNA-Pro [KO:K14232]
ECBD_R0020  tRNA-Ser [KO:K14233]
ECBD_R0042  tRNA-Ser [KO:K14233]
ECBD_R0051  tRNA-Ser [KO:K14233]
ECBD_R0050  tRNA-Ser [KO:K14233]
ECBD_R0052  tRNA-Ser [KO:K14233]
ECBD_R0090  tRNA-Thr [KO:K14234]
ECBD_R0008  tRNA-Thr [KO:K14234]
ECBD_R0070  tRNA-Thr [KO:K14234]
ECBD_R0093  tRNA-Thr [KO:K14234]
ECBD_R0107  tRNA-Trp [KO:K14235]
ECBD_R0048  tRNA-Tyr [KO:K14236]
ECBD_R0049  tRNA-Tyr [KO:K14236]
ECBD_R0092  tRNA-Tyr [KO:K14236]
ECBD_R0031  tRNA-Val [KO:K14237]
ECBD_R0058  tRNA-Val [KO:K14237]
ECBD_R0056  tRNA-Val [KO:K14237]
ECBD_R0033  tRNA-Val [KO:K14237]
ECBD_R0032  tRNA-Val [KO:K14237]
ECBD_R0046  tRNA-Val [KO:K14237]
ECBD_R0047  tRNA-Val [KO:K14237]
ECBD_R0001  tRNA-Sec [KO:K14238]
ECBD_1276  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
ECBD_2981  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
ECBD_1028  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
ECBD_1772  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
ECBD_2665  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
ECBD_0175  glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
ECBD_0176  glycyl-tRNA synthetase, beta subunit [KO:K01879] [EC:6.1.1.14]
ECBD_1926  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
ECBD_2702  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
ECBD_0139  L-seryl-tRNA selenium transferase [KO:K01042] [EC:2.9.1.1]
ECBD_3132  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
ECBD_1544  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
ECBD_0464  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
ECBD_3778  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
ECBD_3009  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
ECBD_3590  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
ECBD_0847  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
ECBD_3901  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
ECBD_1762  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
ECBD_3424  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
ECBD_1172  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
ECBD_1931  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
ECBD_1932  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
ECBD_2006  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
ECBD_0363  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ebd00250  Alanine, aspartate and glutamate metabolism
ebd00260  Glycine, serine and threonine metabolism
ebd00270  Cysteine and methionine metabolism
ebd00290  Valine, leucine and isoleucine biosynthesis
ebd00300  Lysine biosynthesis
ebd00330  Arginine and proline metabolism
ebd00340  Histidine metabolism
ebd00380  Tryptophan metabolism
ebd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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