KEGG   PATHWAY: ecf00030
Entry
ecf00030                    Pathway                                
Name
Pentose phosphate pathway - Escherichia coli O157:H7 EC4115 (EHEC)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ecf00030  Pentose phosphate pathway
ecf00030

Module
ecf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ecf00030]
ecf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ecf00030]
ecf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ecf00030]
ecf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ecf00030]
ecf_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ecf00030]
ecf_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecf00030]
ecf_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecf00030]
Other DBs
GO: 0006098
Organism
Escherichia coli O157:H7 EC4115 (EHEC) [GN:ecf]
Gene
ECH74115_5504  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
ECH74115_2587  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
ECH74115_0870  pgl; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
ECH74115_2962  gnd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
ECH74115_4690  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
ECH74115_3686  tktB; transketolase [KO:K00615] [EC:2.2.1.1]
ECH74115_4237  tktA; transketolase [KO:K00615] [EC:2.2.1.1]
ECH74115_3685  tal1; transaldolase [KO:K00616] [EC:2.2.1.2]
ECH74115_0009  tal2; transaldolase [KO:K00616] [EC:2.2.1.2]
ECH74115_4210  rpiA; ribose 5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
ECH74115_5896  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
ECH74115_5188  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
ECH74115_5898  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
ECH74115_0783  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
ECH74115_5607  phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [KO:K05774] [EC:2.7.4.23]
ECH74115_1688  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
ECH74115_2586  edd; phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
ECH74115_2585  eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
ECH74115_0132  gcd; quinoprotein glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
ECH74115_4929  tkrA; 2-ketogluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
ECH74115_4753  gntK; thermoresistant gluconokinase [KO:K00851] [EC:2.7.1.12]
ECH74115_4890  kdgK; 2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
ECH74115_3076  fbaB; fructose-bisphosphate aldolase, class 1 [KO:K11645] [EC:4.1.2.13]
ECH74115_5597  probable fructose-bisphosphate aldolase 1 [KO:K01624] [EC:4.1.2.13]
ECH74115_4222  fbaA; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
ECH74115_5751  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
ECH74115_5380  glpX1; fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
ECH74115_4232  glpX2; fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
ECH74115_5370  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
ECH74115_2441  pfkB; 6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ecf00010  Glycolysis / Gluconeogenesis
ecf00040  Pentose and glucuronate interconversions
ecf00052  Galactose metabolism
ecf00230  Purine metabolism
ecf00240  Pyrimidine metabolism
ecf00340  Histidine metabolism
ecf00630  Glyoxylate and dicarboxylate metabolism
ecf00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

DBGET integrated database retrieval system