KEGG   PATHWAY: els03022
Entry
els03022                    Pathway                                
Name
Basal transcription factors - Esox lucius (northern pike)
Class
Genetic Information Processing; Transcription
Pathway map
els03022  Basal transcription factors
els03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Esox lucius (northern pike) [GN:els]
Gene
105017688  gtf2a1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
105021103  gtf2a2; transcription initiation factor IIA subunit 2 [KO:K03123]
105023915  gtf2b; transcription initiation factor IIB [KO:K03124]
105018006  tbpl1; TATA box-binding protein-like protein 1 [KO:K03120]
105024716  TATA-box-binding protein isoform X1 [KO:K03120]
105021199  tbp; TATA-box-binding protein [KO:K03120]
105008872  taf1; transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
105016527  taf2; transcription initiation factor TFIID subunit 2 [KO:K03128]
105031574  taf7l; transcription initiation factor TFIID subunit 7-like [KO:K03132]
105013581  taf8; transcription initiation factor TFIID subunit 8 [KO:K14649]
105021816  taf3; transcription initiation factor TFIID subunit 3 isoform X1 [KO:K14650]
105013844  taf10; transcription initiation factor TFIID subunit 10 [KO:K03134]
105012230  taf5; transcription initiation factor TFIID subunit 5 [KO:K03130]
105021502  taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
105011884  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
105025740  taf4; transcription initiation factor TFIID subunit 4 [KO:K03129]
105018106  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
105025715  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
105017338  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
105009015  taf12; transcription initiation factor TFIID subunit 12 [KO:K03126]
105010797  taf6; transcription initiation factor TFIID subunit 6 [KO:K03131]
105020720  taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
105023935  taf9; transcription initiation factor TFIID subunit 9 [KO:K14535]
105022752  taf11; transcription initiation factor TFIID subunit 11 [KO:K03135]
105013749  taf13; transcription initiation factor TFIID subunit 13 [KO:K03127]
105029507  gtf2e1; general transcription factor IIE subunit 1 [KO:K03136]
105007437  gtf2e2; transcription initiation factor IIE subunit beta [KO:K03137]
105024157  general transcription factor IIF subunit 1 isoform X2 [KO:K03138]
114828770  general transcription factor IIF subunit 1-like isoform X1 [KO:K03138]
105016382  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
105020094  gtf2f2; general transcription factor IIF subunit 2 isoform X1 [KO:K03139] [EC:5.6.2.-]
105029696  gtf2h1; general transcription factor IIH subunit 1 [KO:K03141]
105025392  gtf2h2c; general transcription factor IIH subunit 2-like protein isoform X3 [KO:K03142]
105026095  gtf2h3; general transcription factor IIH subunit 3 [KO:K03143]
105012338  gtf2h4; general transcription factor IIH subunit 4 [KO:K03144]
105020092  ercc3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
105012725  ercc2; general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
105030657  gtf2h5; general transcription factor IIH subunit 5 [KO:K10845]
109614561  cdk7; cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
105015562  mnat1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
105014648  ccnh; cyclin-H isoform X1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
els03020  RNA polymerase
els03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

DBGET integrated database retrieval system