KEGG   PATHWAY: fmr00030
Entry
fmr00030                    Pathway                                
Name
Pentose phosphate pathway - Fuerstiella marisgermanici
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
fmr00030  Pentose phosphate pathway
fmr00030

Module
fmr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:fmr00030]
fmr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:fmr00030]
Other DBs
GO: 0006098
Organism
Fuerstiella marisgermanici [GN:fmr]
Gene
Fuma_01977  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Fuma_03763  zwf; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
Fuma_03290  pgl_1; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
Fuma_03345  pgl_2; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
Fuma_05203  pgl_3; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
Fuma_05348  gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
Fuma_01231  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
Fuma_00507  talA; Transaldolase A [KO:K00616] [EC:2.2.1.2]
Fuma_02233  ywlF_2; Putative sugar phosphate isomerase YwlF [KO:K01808] [EC:5.3.1.6]
Fuma_01452  ywlF_1; Putative sugar phosphate isomerase YwlF [KO:K01808] [EC:5.3.1.6]
Fuma_00446  deoC; Deoxyribose-phosphate aldolase 1 [KO:K01619] [EC:4.1.2.4]
Fuma_02630  rbsK; Ribokinase [KO:K00852] [EC:2.7.1.15]
Fuma_00607  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Fuma_04352  prs_1; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Fuma_05476  prs_2; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Fuma_03987  eda; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Fuma_03445  Glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
Fuma_04787  ycdF_2; Glucose 1-dehydrogenase 2 [KO:K00034] [EC:1.1.1.47]
Fuma_03440  Glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
Fuma_00966  yjmD; putative zinc-type alcohol dehydrogenase-like protein YjmD [KO:K22969] [EC:1.1.1.47]
Fuma_01625  quiA; Quinate/shikimate dehydrogenase (quinone) [KO:K00117] [EC:1.1.5.2]
Fuma_01644  gdhB_1; Quinoprotein glucose dehydrogenase B precursor [KO:K00117] [EC:1.1.5.2]
Fuma_06428  gnl_4; Gluconolactonase precursor [KO:K01053] [EC:3.1.1.17]
Fuma_00039  gnl_1; Gluconolactonase precursor [KO:K01053] [EC:3.1.1.17]
Fuma_05445  gnl_3; Gluconolactonase precursor [KO:K01053] [EC:3.1.1.17]
Fuma_05347  iolC_3; 5-dehydro-2-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
Fuma_03988  kdgK; 2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
Fuma_06224  ttuD; Putative hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
Fuma_04579  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
Fuma_06464  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Fuma_00318  fbp; Fructose-1,6-bisphosphatase class 3 [KO:K04041] [EC:3.1.3.11]
Fuma_03825  pfkA_2; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Fuma_03814  pfkA_1; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
fmr00010  Glycolysis / Gluconeogenesis
fmr00040  Pentose and glucuronate interconversions
fmr00052  Galactose metabolism
fmr00230  Purine metabolism
fmr00240  Pyrimidine metabolism
fmr00340  Histidine metabolism
fmr00630  Glyoxylate and dicarboxylate metabolism
fmr00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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