KEGG   PATHWAY: ggo00515
Entry
ggo00515                    Pathway                                
Name
Mannose type O-glycan biosynthesis - Gorilla gorilla gorilla (western lowland gorilla)
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
ggo00515  Mannose type O-glycan biosynthesis
ggo00515

Module
ggo_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:ggo00515]
Other DBs
GO: 0035269
Organism
Gorilla gorilla gorilla (western lowland gorilla) [GN:ggo]
Gene
101129927  POMT1; protein O-mannosyl-transferase 1 isoform X4 [KO:K00728] [EC:2.4.1.109]
101140993  POMT2; protein O-mannosyl-transferase 2 isoform X2 [KO:K00728] [EC:2.4.1.109]
101130676  POMGNT1; protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X1 [KO:K09666] [EC:2.4.1.-]
101138982  B4GALT1; beta-1,4-galactosyltransferase 1 isoform X2 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
101133326  B4GALT2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
101152694  B4GALT3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
101126091  ST3GAL3; LOW QUALITY PROTEIN: CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase [KO:K00781] [EC:2.4.3.6]
101142201  B3GAT1; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X3 [KO:K00735] [EC:2.4.1.135]
101132051  B3GAT2; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 isoform X1 [KO:K10157] [EC:2.4.1.135]
101154520  CHST10; carbohydrate sulfotransferase 10 [KO:K09674] [EC:2.8.2.-]
101149404  FUT9; 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 [KO:K03663] [EC:2.4.1.152]
101143054  FUT4; alpha-(1,3)-fucosyltransferase 4 [KO:K07632] [EC:2.4.1.-]
101135753  MGAT5B; alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1 [KO:K09661] [EC:2.4.1.-]
101154402  POMGNT2; protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [KO:K18207] [EC:2.4.1.312]
101140966  B3GALNT2; UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K09654] [EC:2.4.1.313]
101148209  POMK; protein O-mannose kinase [KO:K17547] [EC:2.7.1.183]
101141405  CRPPA; D-ribitol-5-phosphate cytidylyltransferase isoform X1 [KO:K21031] [EC:2.7.7.40]
101124383  FKTN; ribitol-5-phosphate transferase FKTN isoform X7 [KO:K19872] [EC:2.7.8.-]
101150963  FKRP; ribitol 5-phosphate transferase FKRP [KO:K19873] [EC:2.7.8.-]
101133488  RXYLT1; ribitol-5-phosphate xylosyltransferase 1 isoform X1 [KO:K21052] [EC:2.4.2.61]
101144764  B4GAT1; beta-1,4-glucuronyltransferase 1 [KO:K21032] [EC:2.4.1.-]
101141075  LARGE2; xylosyl- and glucuronyltransferase LARGE2 isoform X2 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
101149289  LARGE1; xylosyl- and glucuronyltransferase LARGE1 isoform X2 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026   
G13027   
G13028   
G13082   
G13083   
G13084  O-Mannose core M1
G13085   
G13086  O-Mannose core M2
G13087   
G13088   
G13089   
G13090   
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093   
G13094   
G13095   
G13096   
G13097   
G13098   
G13099   
G13100   
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
ggo00510  N-Glycan biosynthesis
KO pathway
ko00515   
LinkDB

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