KEGG   PATHWAY: hav00630
Entry
hav00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Hafnia alvei
Class
Metabolism; Carbohydrate metabolism
Pathway map
hav00630  Glyoxylate and dicarboxylate metabolism
hav00630

Module
hav_M00012  Glyoxylate cycle [PATH:hav00630]
hav_M00621  Glycine cleavage system [PATH:hav00630]
Other DBs
GO: 0046487 0043648
Organism
Hafnia alvei [GN:hav]
Gene
AT03_20050  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
AT03_02370  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AT03_20055  malate synthase [KO:K01638] [EC:2.3.3.9]
AT03_03380  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AT03_06845  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AT03_12200  aconitate hydratase [KO:K27802] [EC:4.2.1.3 4.2.1.99]
AT03_18045  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AT03_08655  glutamate mutase [KO:K19268] [EC:5.4.99.1]
AT03_08665  methylaspartate mutase [KO:K01846] [EC:5.4.99.1]
AT03_08650  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
AT03_14470  catalase [KO:K03781] [EC:1.11.1.6]
AT03_09655  ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AT03_00365  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AT03_00395  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AT03_20545  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AT03_00350  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AT03_05290  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AT03_04390  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
AT03_04380  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AT03_01505  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AT03_18055  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AT03_04385  glycine cleavage system protein H [KO:K02437]
AT03_20935  glycerate kinase [KO:K00865] [EC:2.7.1.165]
AT03_02820  1,2-propanediol oxidoreductase [KO:K00048] [EC:1.1.1.77]
AT03_09835  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AT03_20950  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
AT03_20955  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AT03_20960  formate dehydrogenase [KO:K00124]
AT03_20965  formate dehydrogenase [KO:K00127]
AT03_10110  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AT03_09475  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
AT03_09480  formyl-coenzyme A transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hav00010  Glycolysis / Gluconeogenesis
hav00020  Citrate cycle (TCA cycle)
hav00030  Pentose phosphate pathway
hav00053  Ascorbate and aldarate metabolism
hav00071  Fatty acid degradation
hav00230  Purine metabolism
hav00250  Alanine, aspartate and glutamate metabolism
hav00260  Glycine, serine and threonine metabolism
hav00620  Pyruvate metabolism
hav00710  Carbon fixation by Calvin cycle
hav00750  Vitamin B6 metabolism
hav00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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