KEGG   PATHWAY: hfr00010
Entry
hfr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Herbaspirillum frisingense
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hfr00010  Glycolysis / Gluconeogenesis
hfr00010

Module
hfr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:hfr00010]
hfr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hfr00010]
hfr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hfr00010]
Other DBs
GO: 0006096 0006094
Organism
Herbaspirillum frisingense [GN:hfr]
Gene
G5S34_19390  glucokinase [KO:K00845] [EC:2.7.1.2]
G5S34_05500  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
G5S34_13330  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
G5S34_19220  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
G5S34_03580  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
G5S34_09740  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
G5S34_07415  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
G5S34_03570  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
G5S34_00820  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
G5S34_01950  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
G5S34_14520  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
G5S34_03575  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
G5S34_17865  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
G5S34_11955  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
G5S34_07665  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
G5S34_21595  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
G5S34_07670  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
G5S34_07675  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G5S34_15870  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G5S34_14420  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
G5S34_04860  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
G5S34_15380  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
G5S34_15375  c-type cytochrome [KO:K22474] [EC:1.1.5.5]
G5S34_15390  c-type cytochrome [KO:K22474] [EC:1.1.5.5]
G5S34_18430  c-type cytochrome [KO:K22474] [EC:1.1.5.5]
G5S34_05680  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G5S34_12285  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G5S34_10445  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
G5S34_00140  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
G5S34_08545  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
G5S34_05140  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
G5S34_15415  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
G5S34_14175  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
G5S34_02365  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
G5S34_08165  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
G5S34_23000  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
hfr00020  Citrate cycle (TCA cycle)
hfr00030  Pentose phosphate pathway
hfr00500  Starch and sucrose metabolism
hfr00620  Pyruvate metabolism
hfr00640  Propanoate metabolism
hfr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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