KEGG   PATHWAY: hrs00240
Entry
hrs00240                    Pathway                                
Name
Pyrimidine metabolism - Hymenobacter sp. BT18
Class
Metabolism; Nucleotide metabolism
Pathway map
hrs00240  Pyrimidine metabolism
hrs00240

Module
hrs_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:hrs00240]
hrs_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hrs00240]
hrs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:hrs00240]
Other DBs
GO: 0006220 0006213
Organism
Hymenobacter sp. BT18 [GN:hrs]
Gene
HER32_16435  carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit [KO:K01955] [EC:6.3.5.5]
HER32_00470  carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit [KO:K01955] [EC:6.3.5.5]
HER32_16430  carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
HER32_00475  carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
HER32_00495  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
HER32_00490  dihydroorotase [KO:K01465] [EC:3.5.2.3]
HER32_11725  hypothetical protein [KO:K17828] [EC:1.3.1.14]
HER32_13240  quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
HER32_11735  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
HER32_11730  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
HER32_07955  UMP kinase [KO:K09903] [EC:2.7.4.22]
HER32_13625  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
HER32_00790  maf; septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
HER32_05270  CTP synthase [KO:K01937] [EC:6.3.4.2]
HER32_14595  (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
HER32_07090  uridine-cytidine kinase [KO:K00876] [EC:2.7.1.48]
HER32_05970  twin-arginine translocation signal domain-containing protein [KO:K01081] [EC:3.1.3.5]
HER32_19780  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
HER32_19410  nucleoside phosphorylase [KO:K00757] [EC:2.4.2.3]
HER32_13290  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
HER32_19320  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
HER32_02010  nucleoside deaminase [KO:K03365] [EC:3.5.4.1 3.5.4.21]
HER32_18295  dCTP deaminase [KO:K01494] [EC:3.5.4.13]
HER32_09285  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
HER32_09275  ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
HER32_16045  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
HER32_08420  dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
HER32_13585  thymidine kinase [KO:K00857] [EC:2.7.1.21]
HER32_01065  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
HER32_16300  FAD-dependent oxidoreductase [KO:K17722] [EC:1.3.1.1]
HER32_16295  preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [KO:K17723] [EC:1.3.1.1]
HER32_16315  hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
HER32_16305  acyltransferase [KO:K01431] [EC:3.5.1.6]
HER32_19310  SDR family NAD(P)-dependent oxidoreductase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
hrs00030  Pentose phosphate pathway
hrs00220  Arginine biosynthesis
hrs00250  Alanine, aspartate and glutamate metabolism
hrs00280  Valine, leucine and isoleucine degradation
hrs00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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