KEGG   PATHWAY: hze00020
Entry
hze00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Helicoverpa zea (corn earworm)
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hze00020  Citrate cycle (TCA cycle)
hze00020

Module
hze_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hze00020]
hze_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:hze00020]
hze_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:hze00020]
hze_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:hze00020]
hze_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hze00020]
Other DBs
GO: 0006099
Organism
Helicoverpa zea (corn earworm) [GN:hze]
Gene
124644893  probable citrate synthase 2, mitochondrial [KO:K01647] [EC:2.3.3.1]
124644273  ATP-citrate synthase [KO:K01648] [EC:2.3.3.8]
124633019  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
124644467  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
124636746  isocitrate dehydrogenase [NADP] cytoplasmic-like isoform X1 [KO:K00031] [EC:1.1.1.42]
124631169  isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
124636829  probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
124641931  isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
124643701  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like [KO:K00030] [EC:1.1.1.41]
124630848  2-oxoglutarate dehydrogenase, mitochondrial isoform X1 [KO:K00164] [EC:1.2.4.2]
124631496  2-oxoglutarate dehydrogenase, mitochondrial-like [KO:K00164] [EC:1.2.4.2]
124640325  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [KO:K00658] [EC:2.3.1.61]
124644083  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [KO:K00658] [EC:2.3.1.61]
124630215  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
124640882  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial-like [KO:K01899] [EC:6.2.1.4 6.2.1.5]
124644851  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial-like [KO:K01899] [EC:6.2.1.4 6.2.1.5]
124636074  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
124642232  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
124638679  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
124645051  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like [KO:K00234] [EC:1.3.5.1]
124635852  succinate dehydrogenase [ubiquinone] iron-sulfur subunit-like [KO:K00235] [EC:1.3.5.1]
124641843  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [KO:K00235] [EC:1.3.5.1]
124633621  succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [KO:K00236]
124645472  succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [KO:K00236]
124640433  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237]
124636296  fumarate hydratase, mitochondrial-like [KO:K01679] [EC:4.2.1.2]
124636386  fumarate hydratase, mitochondrial-like [KO:K01679] [EC:4.2.1.2]
124629815  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
124639533  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
124632754  malate dehydrogenase-like [KO:K00026] [EC:1.1.1.37]
124637782  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
124638796  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
124636222  pyruvate carboxylase, mitochondrial isoform X1 [KO:K01958] [EC:6.4.1.1]
124636670  pyruvate carboxylase, mitochondrial-like [KO:K01958] [EC:6.4.1.1]
124641650  phosphoenolpyruvate carboxykinase [GTP]-like isoform X1 [KO:K01596] [EC:4.1.1.32]
124635719  probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
124634464  pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
124638791  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1 [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
hze00010  Glycolysis / Gluconeogenesis
hze00053  Ascorbate and aldarate metabolism
hze00061  Fatty acid biosynthesis
hze00062  Fatty acid elongation
hze00071  Fatty acid degradation
hze00190  Oxidative phosphorylation
hze00220  Arginine biosynthesis
hze00250  Alanine, aspartate and glutamate metabolism
hze00280  Valine, leucine and isoleucine degradation
hze00350  Tyrosine metabolism
hze00470  D-Amino acid metabolism
hze00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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