KEGG   PATHWAY: iab00010
Entry
iab00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Idiomarina abyssalis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
iab00010  Glycolysis / Gluconeogenesis
iab00010

Module
iab_M00002  Glycolysis, core module involving three-carbon compounds [PATH:iab00010]
iab_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:iab00010]
iab_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:iab00010]
Other DBs
GO: 0006096 0006094
Organism
Idiomarina abyssalis [GN:iab]
Gene
K5X84_02600  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K5X84_02950  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
K5X84_10695  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
K5X84_10440  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
K5X84_04315  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
K5X84_06375  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
K5X84_10445  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
K5X84_01075  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
K5X84_07105  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
K5X84_06390  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
K5X84_06130  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
K5X84_02145  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
K5X84_02150  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
K5X84_02155  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K5X84_08355  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
K5X84_05480  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
K5X84_09475  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K5X84_09545  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K5X84_05325  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
K5X84_01280  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
iab00020  Citrate cycle (TCA cycle)
iab00030  Pentose phosphate pathway
iab00500  Starch and sucrose metabolism
iab00620  Pyruvate metabolism
iab00640  Propanoate metabolism
iab00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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