KEGG   PATHWAY: jde00010
Entry
jde00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Jonesia denitrificans
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
jde00010  Glycolysis / Gluconeogenesis
jde00010

Module
jde_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:jde00010]
jde_M00002  Glycolysis, core module involving three-carbon compounds [PATH:jde00010]
jde_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:jde00010]
Other DBs
GO: 0006096 0006094
Organism
Jonesia denitrificans [GN:jde]
Gene
Jden_0238  ROK family protein [KO:K25026] [EC:2.7.1.2]
Jden_1441  glucokinase, ROK family [KO:K25026] [EC:2.7.1.2]
Jden_0370  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Jden_1228  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Jden_1438  phosphofructokinase [KO:K00895] [EC:2.7.1.90]
Jden_2420  fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Jden_1258  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Jden_1256  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Jden_1257  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Jden_2086  phosphoglycerate mutase 1 family [KO:K01834] [EC:5.4.2.11]
Jden_1924  enolase [KO:K01689] [EC:4.2.1.11]
Jden_1221  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Jden_1512  2-oxo-acid dehydrogenase E1 subunit, homodimeric type [KO:K00163] [EC:1.2.4.1]
Jden_1476  2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
Jden_1475  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Jden_1053  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
Jden_1798  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Jden_0114  Alcohol dehydrogenase GroES domain protein [KO:K13979] [EC:1.1.1.2]
Jden_1965  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Jden_2230  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Jden_0726  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Jden_0258  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Jden_1492  ROK family protein [KO:K00886] [EC:2.7.1.63]
Jden_0126  Aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
Jden_0939  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
jde00020  Citrate cycle (TCA cycle)
jde00030  Pentose phosphate pathway
jde00500  Starch and sucrose metabolism
jde00620  Pyruvate metabolism
jde00640  Propanoate metabolism
jde00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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