KEGG   PATHWAY: kdi00970
Entry
kdi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Dokdonia sp. 4H-3-7-5
Class
Genetic Information Processing; Translation
Pathway map
kdi00970  Aminoacyl-tRNA biosynthesis
kdi00970

Organism
Dokdonia sp. 4H-3-7-5 [GN:kdi]
Gene
Krodi_R0015  tRNA-Ala [KO:K14218]
Krodi_R0025  tRNA-Ala [KO:K14218]
Krodi_R0044  tRNA-Ala [KO:K14218]
Krodi_R0037  tRNA-Ala [KO:K14218]
Krodi_R0052  tRNA-Arg [KO:K14219]
Krodi_R0049  tRNA-Arg [KO:K14219]
Krodi_R0030  tRNA-Arg [KO:K14219]
Krodi_R0018  tRNA-Asn [KO:K14220]
Krodi_R0017  tRNA-Asp [KO:K14221]
Krodi_R0016  tRNA-Cys [KO:K14222]
Krodi_R0022  tRNA-Gln [KO:K14223]
Krodi_R0040  tRNA-Glu [KO:K14224]
Krodi_R0041  tRNA-Glu [KO:K14224]
Krodi_R0012  tRNA-Gly [KO:K14225]
Krodi_R0005  tRNA-Gly [KO:K14225]
Krodi_R0008  tRNA-Gly [KO:K14225]
Krodi_R0054  tRNA-His [KO:K14226]
Krodi_R0024  tRNA-Ile [KO:K14227]
Krodi_R0043  tRNA-Ile [KO:K14227]
Krodi_R0036  tRNA-Ile [KO:K14227]
Krodi_R0014  tRNA-Leu [KO:K14228]
Krodi_R0019  tRNA-Leu [KO:K14228]
Krodi_R0013  tRNA-Leu [KO:K14228]
Krodi_R0031  tRNA-Leu [KO:K14228]
Krodi_R0032  tRNA-Lys [KO:K14229]
Krodi_R0033  tRNA-Lys [KO:K14229]
Krodi_R0002  tRNA-Met [KO:K14230]
Krodi_R0011  tRNA-Met [KO:K14230]
Krodi_R0028  tRNA-Met [KO:K14230]
Krodi_R0010  tRNA-Phe [KO:K14231]
Krodi_R0020  tRNA-Pro [KO:K14232]
Krodi_R0021  tRNA-Pro [KO:K14232]
Krodi_R0051  tRNA-Pro [KO:K14232]
Krodi_R0050  tRNA-Ser [KO:K14233]
Krodi_R0048  tRNA-Ser [KO:K14233]
Krodi_R0029  tRNA-Ser [KO:K14233]
Krodi_R0007  tRNA-Thr [KO:K14234]
Krodi_R0047  tRNA-Thr [KO:K14234]
Krodi_R0004  tRNA-Thr [KO:K14234]
Krodi_R0003  tRNA-Trp [KO:K14235]
Krodi_R0006  tRNA-Tyr [KO:K14236]
Krodi_R0009  tRNA-Val [KO:K14237]
Krodi_1171  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
Krodi_1165  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
Krodi_1609  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Krodi_1455  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
Krodi_0697  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
Krodi_0944  glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
Krodi_2113  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Krodi_0990  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Krodi_0391  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Krodi_1009  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Krodi_2142  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Krodi_1784  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Krodi_1349  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Krodi_1084  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Krodi_1637  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
Krodi_0474  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Krodi_2135  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Krodi_2501  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Krodi_1321  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
Krodi_2904  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
Krodi_1463  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Krodi_1076  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
kdi00250  Alanine, aspartate and glutamate metabolism
kdi00260  Glycine, serine and threonine metabolism
kdi00270  Cysteine and methionine metabolism
kdi00290  Valine, leucine and isoleucine biosynthesis
kdi00300  Lysine biosynthesis
kdi00330  Arginine and proline metabolism
kdi00340  Histidine metabolism
kdi00380  Tryptophan metabolism
kdi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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