KEGG   PATHWAY: kzo00630
Entry
kzo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Kurthia zopfii
Class
Metabolism; Carbohydrate metabolism
Pathway map
kzo00630  Glyoxylate and dicarboxylate metabolism
kzo00630

Module
kzo_M00012  Glyoxylate cycle [PATH:kzo00630]
kzo_M00621  Glycine cleavage system [PATH:kzo00630]
Other DBs
GO: 0046487 0043648
Organism
Kurthia zopfii [GN:kzo]
Gene
NCTC404_00203  aceA; Isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
NCTC404_02867  bclA_2; Benzoate--CoA ligase [KO:K01895] [EC:6.2.1.1]
NCTC404_02887  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
NCTC404_00202  aceB; Malate synthase A [KO:K01638] [EC:2.3.3.9]
NCTC404_02037  mdh_1; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NCTC404_02838  mdh_2; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NCTC404_02840  citZ; Citrate synthase 2 [KO:K01659] [EC:2.3.3.5]
NCTC404_02148  citB; Aconitate hydratase [KO:K27802] [EC:4.2.1.3 4.2.1.99]
NCTC404_00488  thlA_1; Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NCTC404_02038  phaJ_1; (R)-specific enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
NCTC404_02837  phaJ_2; (R)-specific enoyl-CoA hydratase [KO:K17865] [EC:4.2.1.55]
NCTC404_02385  gloA; Lactoylglutathione lyase [KO:K05606] [EC:5.1.99.1]
NCTC404_02384  Methylmalonyl-CoA carboxyltransferase 12S subunit [KO:K01966] [EC:6.4.1.3 2.1.3.15]
NCTC404_02391  mutB; Methylmalonyl-CoA mutase large subunit [KO:K01847] [EC:5.4.99.2]
NCTC404_02392  mutA; Methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
NCTC404_00624  katA; Catalase [KO:K03781] [EC:1.11.1.6]
NCTC404_00594  ghrB; Glyoxylate/hydroxypyruvate reductase B [KO:K00015] [EC:1.1.1.26]
NCTC404_01836  gph; Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
NCTC404_03065  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
NCTC404_00452  glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NCTC404_02433  gcvPA; Probable glycine dehydrogenase [decarboxylating] subunit 1 [KO:K00282] [EC:1.4.4.2]
NCTC404_02432  gcvPB; Probable glycine dehydrogenase [decarboxylating] subunit 2 [KO:K00283] [EC:1.4.4.2]
NCTC404_02434  gcvT; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
NCTC404_02396  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NCTC404_00191  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NCTC404_02824  merA; Mercuric reductase [KO:K00382] [EC:1.8.1.4]
NCTC404_01598  gcvH; Octanoyl/lipoyl carrier protein [KO:K02437]
NCTC404_00972  Putative formate dehydrogenase SA2102 [KO:K00123] [EC:1.17.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
kzo00010  Glycolysis / Gluconeogenesis
kzo00020  Citrate cycle (TCA cycle)
kzo00030  Pentose phosphate pathway
kzo00071  Fatty acid degradation
kzo00230  Purine metabolism
kzo00250  Alanine, aspartate and glutamate metabolism
kzo00260  Glycine, serine and threonine metabolism
kzo00620  Pyruvate metabolism
kzo00710  Carbon fixation by Calvin cycle
kzo00750  Vitamin B6 metabolism
kzo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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