KEGG   PATHWAY: lbx00240
Entry
lbx00240                    Pathway                                
Name
Pyrimidine metabolism - Lachnospiraceae bacterium KM106-2
Class
Metabolism; Nucleotide metabolism
Pathway map
lbx00240  Pyrimidine metabolism
lbx00240

Module
lbx_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:lbx00240]
Other DBs
GO: 0006220 0006213
Organism
Lachnospiraceae bacterium KM106-2 [GN:lbx]
Gene
lbkm_0118  carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
lbkm_0117  carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
lbkm_0767  aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
lbkm_0766  aspartate carbamoyltransferase regulatory chain [KO:K00610]
lbkm_0178  dihydroorotase [KO:K01465] [EC:3.5.2.3]
lbkm_0182  dihydroorotate dehydrogenase, catalytic subunit [KO:K17828] [EC:1.3.1.14]
lbkm_0181  dihydroorotate dehydrogenase electron transfer subunit [KO:K02823]
lbkm_0183  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
lbkm_0179  orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
lbkm_1615  uridine monophosphate kinase [KO:K09903] [EC:2.7.4.22]
lbkm_3508  nucleoside triphosphate pyrophosphohydrolase MazG [KO:K04765] [EC:3.6.1.9]
lbkm_2020  septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
lbkm_3712  CTP synthase [KO:K01937] [EC:6.3.4.2]
lbkm_0781  cytidylate kinase [KO:K00945] [EC:2.7.4.25]
lbkm_3878  uridine kinase [KO:K00876] [EC:2.7.1.48]
lbkm_4067  uridine kinase [KO:K00876] [EC:2.7.1.48]
lbkm_3744  N-Ribosylnicotinamide phosphorylase [KO:K00757] [EC:2.4.2.3]
lbkm_4175  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
lbkm_2331  2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
lbkm_3781  pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
lbkm_2503  pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
lbkm_3777  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
lbkm_2504  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
lbkm_4129  ribonucleotide reductase of class III (anaerobic), large subunit [KO:K21636] [EC:1.1.98.6]
lbkm_0111  ribonucleotide reductase of class III (anaerobic), large subunit [KO:K21636] [EC:1.1.98.6]
lbkm_1420  ribonucleotide reductase of class III (anaerobic), large subunit [KO:K21636] [EC:1.1.98.6]
lbkm_0540  ribonucleotide reductase of class Ia (aerobic), alpha subunit [KO:K00525] [EC:1.17.4.1]
lbkm_0541  ribonucleotide reductase of class Ia (aerobic), beta subunit [KO:K00526] [EC:1.17.4.1]
lbkm_3573  nucleotidase YfbR, HD superfamily [KO:K08722] [EC:3.1.3.89]
lbkm_3982  dCMP deaminase [KO:K01493] [EC:3.5.4.12]
lbkm_4131  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
lbkm_1129  thymidine kinase [KO:K00857] [EC:2.7.1.21]
lbkm_0112  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lbx00030  Pentose phosphate pathway
lbx00220  Arginine biosynthesis
lbx00250  Alanine, aspartate and glutamate metabolism
lbx00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   
LinkDB

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