KEGG   PATHWAY: lfe00970
Entry
lfe00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Limosilactobacillus fermentum IFO 3956
Class
Genetic Information Processing; Translation
Pathway map
lfe00970  Aminoacyl-tRNA biosynthesis
lfe00970

Organism
Limosilactobacillus fermentum IFO 3956 [GN:lfe]
Gene
LAF_tRNA06  tRNA-Ala [KO:K14218]
LAF_tRNA46  tRNA-Ala [KO:K14218]
LAF_tRNA12  tRNA-Arg [KO:K14219]
LAF_tRNA21  tRNA-Arg [KO:K14219]
LAF_tRNA50  tRNA-Arg [KO:K14219]
LAF_tRNA36  tRNA-Arg [KO:K14219]
LAF_tRNA48  tRNA-Arg [KO:K14219]
LAF_tRNA07  tRNA-Asn [KO:K14220]
LAF_tRNA26  tRNA-Asp [KO:K14221]
LAF_tRNA32  tRNA-Asp [KO:K14221]
LAF_tRNA54  tRNA-Asp [KO:K14221]
LAF_tRNA39  tRNA-Cys [KO:K14222]
LAF_tRNA15  tRNA-Gln [KO:K14223]
LAF_tRNA10  tRNA-Gln [KO:K14223]
LAF_tRNA35  tRNA-Gln [KO:K14223]
LAF_tRNA45  tRNA-Glu [KO:K14224]
LAF_tRNA30  tRNA-Glu [KO:K14224]
LAF_tRNA02  tRNA-Glu [KO:K14224]
LAF_tRNA14  tRNA-Glu [KO:K14224]
LAF_tRNA28  tRNA-Gly [KO:K14225]
LAF_tRNA37  tRNA-Gly [KO:K14225]
LAF_tRNA19  tRNA-Gly [KO:K14225]
LAF_tRNA51  tRNA-Gly [KO:K14225]
LAF_tRNA40  tRNA-His [KO:K14226]
LAF_tRNA05  tRNA-Ile [KO:K14227]
LAF_tRNA47  tRNA-Ile [KO:K14227]
LAF_tRNA29  tRNA-Ile [KO:K14227]
LAF_tRNA20  tRNA-Leu [KO:K14228]
LAF_tRNA38  tRNA-Leu [KO:K14228]
LAF_tRNA13  tRNA-Leu [KO:K14228]
LAF_tRNA11  tRNA-Leu [KO:K14228]
LAF_tRNA34  tRNA-Leu [KO:K14228]
LAF_tRNA52  tRNA-Leu [KO:K14228]
LAF_tRNA17  tRNA-Lys [KO:K14229]
LAF_tRNA01  tRNA-Lys [KO:K14229]
LAF_tRNA23  tRNA-Met [KO:K14230]
LAF_tRNA25  tRNA-Met [KO:K14230]
LAF_tRNA31  tRNA-Met [KO:K14230]
LAF_tRNA24  tRNA-Met [KO:K14230]
LAF_tRNA27  tRNA-Phe [KO:K14231]
LAF_tRNA43  tRNA-Phe [KO:K14231]
LAF_tRNA49  tRNA-Pro [KO:K14232]
LAF_tRNA22  tRNA-Pro [KO:K14232]
LAF_tRNA33  tRNA-Ser [KO:K14233]
LAF_tRNA08  tRNA-Thr [KO:K14234]
LAF_tRNA18  tRNA-Thr [KO:K14234]
LAF_tRNA03  tRNA-Thr [KO:K14234]
LAF_tRNA04  tRNA-Thr [KO:K14234]
LAF_tRNA41  tRNA-Trp [KO:K14235]
LAF_tRNA09  tRNA-Tyr [KO:K14236]
LAF_tRNA42  tRNA-Tyr [KO:K14236]
LAF_tRNA16  tRNA-Val [KO:K14237]
LAF_tRNA53  tRNA-Val [KO:K14237]
LAF_tRNA44  tRNA-Val [KO:K14237]
LAF_0259  glutamyl-tRNA synthase [KO:K09698] [EC:6.1.1.24]
LAF_1472  glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LAF_1471  glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
LAF_1473  glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
LAF_0521  alanyl-tRNA synthase [KO:K01872] [EC:6.1.1.7]
LAF_0833  aspartyl-tRNA synthase [KO:K01876] [EC:6.1.1.12]
LAF_1189  asparaginyl-tRNA synthase [KO:K01893] [EC:6.1.1.22]
LAF_0842  glycyl-tRNA synthase alpha subunit [KO:K01878] [EC:6.1.1.14]
LAF_0843  glycyl-tRNA synthase beta subunit [KO:K01879] [EC:6.1.1.14]
LAF_1830  threonyl-tRNA synthase [KO:K01868] [EC:6.1.1.3]
LAF_0066  seryl-tRNA synthase [KO:K01875] [EC:6.1.1.11]
LAF_0261  cysteinyl-tRNA synthase [KO:K01883] [EC:6.1.1.16]
LAF_0186  methionyl-tRNA synthase [KO:K01874] [EC:6.1.1.10]
LAF_1251  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
LAF_0497  valyl-tRNA synthase [KO:K01873] [EC:6.1.1.9]
LAF_1354  leucyl-tRNA synthase [KO:K01869] [EC:6.1.1.4]
LAF_0582  isoleucyl-tRNA synthase [KO:K01870] [EC:6.1.1.5]
LAF_0224  lysyl-tRNA synthase [KO:K04567] [EC:6.1.1.6]
LAF_1333  arginyl-tRNA synthase [KO:K01887] [EC:6.1.1.19]
LAF_0721  prolyl-tRNA synthase [KO:K01881] [EC:6.1.1.15]
LAF_0832  histidyl-tRNA synthase [KO:K01892] [EC:6.1.1.21]
LAF_1289  phenylalanyl-tRNA synthase alpha subunit [KO:K01889] [EC:6.1.1.20]
LAF_1288  phenylalanyl-tRNA synthase beta subunit [KO:K01890] [EC:6.1.1.20]
LAF_0068  tyrosyl-tRNA synthase [KO:K01866] [EC:6.1.1.1]
LAF_0067  tryptophanyl-tRNA synthase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
lfe00250  Alanine, aspartate and glutamate metabolism
lfe00260  Glycine, serine and threonine metabolism
lfe00270  Cysteine and methionine metabolism
lfe00290  Valine, leucine and isoleucine biosynthesis
lfe00300  Lysine biosynthesis
lfe00330  Arginine and proline metabolism
lfe00340  Histidine metabolism
lfe00380  Tryptophan metabolism
lfe00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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