KEGG   PATHWAY: mbok00630
Entry
mbok00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mycolicibacterium boenickei
Class
Metabolism; Carbohydrate metabolism
Pathway map
mbok00630  Glyoxylate and dicarboxylate metabolism
mbok00630

Module
mbok_M00012  Glyoxylate cycle [PATH:mbok00630]
mbok_M00621  Glycine cleavage system [PATH:mbok00630]
mbok_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mbok00630]
Other DBs
GO: 0046487 0043648
Organism
Mycolicibacterium boenickei [GN:mbok]
Gene
MBOE_02720  aceA_1; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
MBOE_39940  aceA_2; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
MBOE_06270  hypothetical protein [KO:K01895] [EC:6.2.1.1]
MBOE_22930  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
MBOE_57970  hypothetical protein [KO:K01895] [EC:6.2.1.1]
MBOE_40500  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
MBOE_56300  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
MBOE_22660  citrate synthase [KO:K01647] [EC:2.3.3.1]
MBOE_22700  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
MBOE_32930  gltA1; citrate synthase [KO:K01647] [EC:2.3.3.1]
MBOE_01600  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
MBOE_45050  acnA; aconitate hydratase A [KO:K01681] [EC:4.2.1.3]
MBOE_03770  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_04330  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_04580  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_15500  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_21980  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_23460  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_24300  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_26810  putative acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MBOE_30540  putative acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_37600  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_40800  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_53060  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_53190  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_57960  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_59140  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_59440  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MBOE_30530  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
MBOE_56280  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
MBOE_56200  propionyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
MBOE_56210  hypothetical protein [KO:K27095]
MBOE_35980  propionyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
MBOE_44890  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
MBOE_44900  mutA; methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
MBOE_31070  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
MBOE_31060  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
MBOE_15050  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
MBOE_29220  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
MBOE_45810  catalase-related peroxidase [KO:K03781] [EC:1.11.1.6]
MBOE_54310  katA_1; catalase [KO:K03781] [EC:1.11.1.6]
MBOE_59910  katA_2; catalase [KO:K03781] [EC:1.11.1.6]
MBOE_36140  5'-nucleotidase [KO:K01091] [EC:3.1.3.18]
MBOE_07620  glnT; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MBOE_15390  glnA3; glutamine synthetase GlnA [KO:K01915] [EC:6.3.1.2]
MBOE_36320  glnA_1; putative glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
MBOE_36390  glnA_2; glutamine synthetase 1 [KO:K01915] [EC:6.3.1.2]
MBOE_41140  glnA_3; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MBOE_41220  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
MBOE_49720  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
MBOE_60580  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MBOE_18440  glyA2; serine hydroxymethyltransferase 2 [KO:K00600] [EC:2.1.2.1]
MBOE_27060  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MBOE_18410  gcvP_1; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
MBOE_40480  gcvP_2; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
MBOE_18420  gcvT_1; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
MBOE_36510  gcvT_2; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
MBOE_02810  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MBOE_18470  pdhD; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MBOE_18430  gcvH_1; glycine cleavage system H protein [KO:K02437]
MBOE_40430  gcvH_2; glycine cleavage system H protein [KO:K02437]
MBOE_33640  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
MBOE_50330  glycerate kinase [KO:K00865] [EC:2.7.1.165]
MBOE_16560  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
MBOE_39130  eda; 2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
MBOE_29080  kgd; multifunctional 2-oxoglutarate metabolism enzyme [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
MBOE_53270  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
MBOE_35430  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mbok00010  Glycolysis / Gluconeogenesis
mbok00020  Citrate cycle (TCA cycle)
mbok00030  Pentose phosphate pathway
mbok00053  Ascorbate and aldarate metabolism
mbok00071  Fatty acid degradation
mbok00230  Purine metabolism
mbok00250  Alanine, aspartate and glutamate metabolism
mbok00260  Glycine, serine and threonine metabolism
mbok00620  Pyruvate metabolism
mbok00710  Carbon fixation by Calvin cycle
mbok00750  Vitamin B6 metabolism
mbok00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system