KEGG   PATHWAY: mdf00010
Entry
mdf00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Mycolicibacterium diernhoferi
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mdf00010  Glycolysis / Gluconeogenesis
mdf00010

Module
mdf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mdf00010]
mdf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mdf00010]
mdf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mdf00010]
mdf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mdf00010]
Other DBs
GO: 0006096 0006094
Organism
Mycolicibacterium diernhoferi [GN:mdf]
Gene
K0O62_05515  ROK family protein [KO:K25026] [EC:2.7.1.2]
K0O62_23715  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K0O62_05600  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
K0O62_06345  1-phosphofructokinase family hexose kinase [KO:K16370] [EC:2.7.1.11]
K0O62_10615  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
K0O62_22450  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
K0O62_03530  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
K0O62_13505  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
K0O62_13495  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
K0O62_13500  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
K0O62_04255  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
K0O62_23205  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
K0O62_08645  enolase [KO:K01689] [EC:4.2.1.11]
K0O62_17525  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
K0O62_09245  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
K0O62_18240  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
K0O62_17970  sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
K0O62_03325  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K0O62_04120  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K0O62_19535  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
K0O62_19530  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
K0O62_01555  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
K0O62_25090  NDMA-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
K0O62_01560  NDMA-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
K0O62_06470  zinc-binding alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
K0O62_06655  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
K0O62_10405  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
K0O62_11205  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_11505  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_15880  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_18985  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_20445  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_21545  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_25055  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
K0O62_27350  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
K0O62_28330  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
K0O62_01210  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_01915  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
K0O62_05635  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_06800  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_08225  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_09855  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
K0O62_16080  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
K0O62_06650  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
K0O62_24160  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
K0O62_26525  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K0O62_08595  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K0O62_05000  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
K0O62_03425  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
K0O62_08425  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
K0O62_09600  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
K0O62_12400  ROK family protein [KO:K00886] [EC:2.7.1.63]
K0O62_01770  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
K0O62_09525  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mdf00020  Citrate cycle (TCA cycle)
mdf00030  Pentose phosphate pathway
mdf00500  Starch and sucrose metabolism
mdf00620  Pyruvate metabolism
mdf00640  Propanoate metabolism
mdf00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system