KEGG   PATHWAY: mea00240
Entry
mea00240                    Pathway                                
Name
Pyrimidine metabolism - Methylorubrum extorquens AM1
Class
Metabolism; Nucleotide metabolism
Pathway map
mea00240  Pyrimidine metabolism
mea00240

Other DBs
GO: 0006220 0006213
Organism
Methylorubrum extorquens AM1 [GN:mea]
Gene
Mex_1p0858  carB; carbamoyl phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
Mex_1p0440  carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit [KO:K01956] [EC:6.3.5.5]
Mex_1p3527  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
Mex_1p3528  pyrC; putative dihydroorotase-like protein [KO:K01465] [EC:3.5.2.3]
Mex_1p4700  pyrC; putative dihydroorotase-like protein [KO:K01465] [EC:3.5.2.3]
Mex_1p2095  pyrD; dihydro-orotate oxidase, FMN-linked [KO:K00254] [EC:1.3.5.2]
Mex_1p3406  pyrE; orotate phosphoribosyltransferase (OPRT) (OPRTase) [KO:K00762] [EC:2.4.2.10]
Mex_1p1411  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
Mex_1p2059  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
Mex_1p4291  mazG; nucleoside triphosphate pyrophosphohydrolase MazG [KO:K04765] [EC:3.6.1.9]
Mex_1p2817  putative septum formation protein, Maf-like protein [KO:K06287] [EC:3.6.1.-]
Mex_1p1382  Maf-like protein [KO:K06287] [EC:3.6.1.-]
Mex_1p5110  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
Mex_1p2119  cmk; cytidine monophosphate (CMP) kinase [KO:K00945] [EC:2.7.4.25]
Mex_1p1365  putative 5'-nucleotidase, 2'3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Mex_1p4626  surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase) [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Mex_1p1439  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
Mex_1p2363  conserved hypothetical protein [KO:K09769] [EC:3.1.4.16]
Mex_1p3171  cdd; cytidine deaminase (cytidine aminohydrolase) [KO:K01489] [EC:3.5.4.5]
Mex_1p1649  putative N-isopropylammelide isopropylaminohydrolase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
Mex_1p0286  dcd; 2'-deoxycytidine 5'-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
Mex_2p0327  conserved hypothetical protein [KO:K01494] [EC:3.5.4.13]
Mex_1p0872  nrd; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent, large subunit [KO:K00525] [EC:1.17.4.1]
Mex_2p0021  nrd; ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
Mex_1p4703  Metal-dependent phosphohydrolase [KO:K06952] [EC:3.1.3.89]
Mex_2p0607  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
Mex_1p4582  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
Mex_1p1415  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
Mex_1p3168  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
Mex_1p2853  thyA; thymidylate synthetase [KO:K00560] [EC:2.1.1.45]
Mex_1p4124  Amidase, hydantoinase/carbamoylase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
Mex_1p1664  putative luciferase family protein, putative flavin-dependent oxidoreductase [KO:K09018] [EC:1.14.99.46]
Mex_1p3229  flavin:NADH oxidoreductase, putative alternative pyrimidine degradation enzyme [KO:K09024] [EC:1.5.1.-]
Mex_1p1660  flavin reductase domain protein, FMN-binding [KO:K09024] [EC:1.5.1.-]
Mex_1p1663  rutB; enzyme of alternative pyrimidine degradation pathway [KO:K09020] [EC:3.5.1.110]
Mex_1p1662  rutC; enzyme of alternative pyrimidine degradation pathway [KO:K09021]
Mex_1p1661  rutD; putative enzyme of alternative pyrimidine degradation pathway, putative alpha/beta hydrolase [KO:K09023] [EC:3.5.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
mea00030  Pentose phosphate pathway
mea00220  Arginine biosynthesis
mea00250  Alanine, aspartate and glutamate metabolism
mea00280  Valine, leucine and isoleucine degradation
mea00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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