KEGG   PATHWAY: mky00630
Entry
mky00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Mycobacterium kiyosense
Class
Metabolism; Carbohydrate metabolism
Pathway map
mky00630  Glyoxylate and dicarboxylate metabolism
mky00630

Module
mky_M00012  Glyoxylate cycle [PATH:mky00630]
mky_M00621  Glycine cleavage system [PATH:mky00630]
mky_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mky00630]
Other DBs
GO: 0046487 0043648
Organism
Mycobacterium kiyosense [GN:mky]
Gene
IWGMT90018_07960  aceA_1; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
IWGMT90018_29130  aceA_2; isocitrate lyase 2 [KO:K01637] [EC:4.1.3.1]
IWGMT90018_58700  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
IWGMT90018_30120  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
IWGMT90018_48180  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
IWGMT90018_49620  citrate synthase [KO:K01647] [EC:2.3.3.1]
IWGMT90018_53220  gltA2; citrate synthase 1 [KO:K01647] [EC:2.3.3.1]
IWGMT90018_53300  citA; putative citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
IWGMT90018_34950  acn; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
IWGMT90018_56820  ltp3; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_57190  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_57320  fadA6; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_05220  fadA2; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_29860  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_42220  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_42520  fadA4; putative acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_43630  atoB_1; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_47330  thiolase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_47350  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_50610  fadA3; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_52410  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_52900  atoB_2; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_53020  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_53640  fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_09360  transporter [KO:K00626] [EC:2.3.1.9]
IWGMT90018_41950  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
IWGMT90018_42530  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
IWGMT90018_12890  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
IWGMT90018_12930  hypothetical protein [KO:K27095]
IWGMT90018_24100  accD6; putative propionyl-CoA carboxylase beta chain 6 [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
IWGMT90018_34720  mutB; putative methylmalonyl-CoA mutase large subunit [KO:K01847] [EC:5.4.99.2]
IWGMT90018_34730  mutA; putative methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
IWGMT90018_55190  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
IWGMT90018_55200  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
IWGMT90018_23480  dehydrogenase [KO:K00104] [EC:1.1.99.14]
IWGMT90018_47970  oxidoreductase [KO:K00104] [EC:1.1.99.14]
IWGMT90018_54760  catalase [KO:K03781] [EC:1.11.1.6]
IWGMT90018_59460  katA; catalase [KO:K03781] [EC:1.11.1.6]
IWGMT90018_24460  hypothetical protein [KO:K01091] [EC:3.1.3.18]
IWGMT90018_16890  glnA1_1; glutamine synthetase 1 [KO:K01915] [EC:6.3.1.2]
IWGMT90018_24560  glnA2; putative glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
IWGMT90018_24600  glnA1_2; glutamine synthetase 1 [KO:K01915] [EC:6.3.1.2]
IWGMT90018_29660  glnA3; glutamine synthetase GlnA [KO:K01915] [EC:6.3.1.2]
IWGMT90018_31600  hypothetical protein [KO:K01915] [EC:6.3.1.2]
IWGMT90018_39730  glnA4; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
IWGMT90018_16660  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
IWGMT90018_50340  glyA1; serine hydroxymethyltransferase 1 [KO:K00600] [EC:2.1.2.1]
IWGMT90018_30150  gcvP; putative glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
IWGMT90018_24730  hypothetical protein [KO:K00605] [EC:2.1.2.10]
IWGMT90018_07890  lpdC; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
IWGMT90018_30200  gcvH; glycine cleavage system H protein [KO:K02437]
IWGMT90018_24810  hypothetical protein [KO:K00865] [EC:2.7.1.165]
IWGMT90018_48130  hypothetical protein [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
IWGMT90018_05130  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
IWGMT90018_02120  dehydrogenase [KO:K00123] [EC:1.17.1.9]
IWGMT90018_02130  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
IWGMT90018_02140  4Fe-4S ferredoxin [KO:K00124]
IWGMT90018_03230  oxcA; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mky00010  Glycolysis / Gluconeogenesis
mky00020  Citrate cycle (TCA cycle)
mky00030  Pentose phosphate pathway
mky00053  Ascorbate and aldarate metabolism
mky00071  Fatty acid degradation
mky00230  Purine metabolism
mky00250  Alanine, aspartate and glutamate metabolism
mky00260  Glycine, serine and threonine metabolism
mky00620  Pyruvate metabolism
mky00710  Carbon fixation by Calvin cycle
mky00750  Vitamin B6 metabolism
mky00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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