KEGG   PATHWAY: mmed00970
Entry
mmed00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Martelella mediterranea
Class
Genetic Information Processing; Translation
Pathway map
mmed00970  Aminoacyl-tRNA biosynthesis
mmed00970

Organism
Martelella mediterranea [GN:mmed]
Gene
Mame_02315  tRNA-Ala [KO:K14218]
Mame_03821  tRNA-Ala [KO:K14218]
Mame_00581  tRNA-Ala [KO:K14218]
Mame_01505  tRNA-Ala [KO:K14218]
Mame_02357  tRNA-Arg [KO:K14219]
Mame_03776  tRNA-Arg [KO:K14219]
Mame_02030  tRNA-Arg [KO:K14219]
Mame_03123  tRNA-Arg [KO:K14219]
Mame_03020  tRNA-Asn [KO:K14220]
Mame_03337  tRNA-Asp [KO:K14221]
Mame_03017  tRNA-Cys [KO:K14222]
Mame_01152  tRNA-Gln [KO:K14223]
Mame_03738  tRNA-Gln [KO:K14223]
Mame_03087  tRNA-Glu [KO:K14224]
Mame_03088  tRNA-Glu [KO:K14224]
Mame_01446  tRNA-Gly [KO:K14225]
Mame_04261  tRNA-Gly [KO:K14225]
Mame_02364  tRNA-Gly [KO:K14225]
Mame_01963  tRNA-His [KO:K14226]
Mame_00582  tRNA-Ile [KO:K14227]
Mame_01504  tRNA-Ile [KO:K14227]
Mame_00856  tRNA-Ser [KO:K14228]
Mame_02776  tRNA-Leu [KO:K14228]
Mame_02688  tRNA-Leu [KO:K14228]
Mame_02563  tRNA-Leu [KO:K14228]
Mame_01003  tRNA-Leu [KO:K14228]
Mame_03128  tRNA-Lys [KO:K14229]
Mame_03131  tRNA-Lys [KO:K14229]
Mame_00577  tRNA-Met [KO:K14230]
Mame_02282  tRNA-Met [KO:K14230]
Mame_01733  tRNA-Met [KO:K14230]
Mame_01509  tRNA-Met [KO:K14230]
Mame_01351  tRNA-Phe [KO:K14231]
Mame_03083  tRNA-Pro [KO:K14232]
Mame_02154  tRNA-Pro [KO:K14232]
Mame_02009  tRNA-Pro [KO:K14232]
Mame_00053  tRNA-Ser [KO:K14233]
Mame_02921  tRNA-Ser [KO:K14233]
Mame_03296  tRNA-Ser [KO:K14233]
Mame_01767  tRNA-Ser [KO:K14233]
Mame_01778  tRNA-Ser [KO:K14233]
Mame_02191  tRNA-Thr [KO:K14234]
Mame_03104  tRNA-Thr [KO:K14234]
Mame_00614  tRNA-Thr [KO:K14234]
Mame_04000  tRNA-Trp [KO:K14235]
Mame_02363  tRNA-Tyr [KO:K14236]
Mame_03338  tRNA-Val [KO:K14237]
Mame_00983  tRNA-Val [KO:K14237]
Mame_04280  gltX_2; Glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
Mame_05174  gatA_3; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Mame_02375  gatA_1; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Mame_02438  gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
Mame_02374  gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
Mame_03207  alaS_2; Alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
Mame_03636  aspS; Aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
Mame_02167  glyQ; Glycine--tRNA ligase alpha subunit [KO:K01878] [EC:6.1.1.14]
Mame_02172  glyS; Glycine--tRNA ligase beta subunit [KO:K01879] [EC:6.1.1.14]
Mame_03473  thrS; Threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
Mame_03281  serS; Serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
Mame_01657  selA; L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
Mame_02650  cysS; Cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
Mame_02925  metG_1; Methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
Mame_03768  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Mame_03013  valS; Valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
Mame_00740  leuS; Leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
Mame_03868  ileS; Isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
Mame_04279  lysS; Lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
Mame_02694  argS; Arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
Mame_02559  proS; Proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
Mame_01199  hisS_2; Histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
Mame_00873  pheS; Phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
Mame_00871  pheT; Phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
Mame_03446  tyrS; Tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
Mame_03912  trpS; Tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
mmed00250  Alanine, aspartate and glutamate metabolism
mmed00260  Glycine, serine and threonine metabolism
mmed00270  Cysteine and methionine metabolism
mmed00290  Valine, leucine and isoleucine biosynthesis
mmed00300  Lysine biosynthesis
mmed00330  Arginine and proline metabolism
mmed00340  Histidine metabolism
mmed00380  Tryptophan metabolism
mmed00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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