KEGG   PATHWAY: mna00515
Entry
mna00515                    Pathway                                
Name
Mannose type O-glycan biosynthesis - Miniopterus natalensis (Natal long-fingered bat)
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
mna00515  Mannose type O-glycan biosynthesis
mna00515

Module
mna_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:mna00515]
Other DBs
GO: 0035269
Organism
Miniopterus natalensis (Natal long-fingered bat) [GN:mna]
Gene
107542811  POMT2; protein O-mannosyl-transferase 2 [KO:K00728] [EC:2.4.1.109]
107524639  POMT1; protein O-mannosyl-transferase 1 isoform X1 [KO:K00728] [EC:2.4.1.109]
107526729  POMGNT1; protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 [KO:K09666] [EC:2.4.1.-]
107544980  B4GALT1; beta-1,4-galactosyltransferase 1 isoform X1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107526700  B4GALT2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
107531762  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
107535094  B4GALT3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
107526698  ST3GAL3; CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1 [KO:K00781] [EC:2.4.3.6]
107539435  B3GAT1; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [KO:K00735] [EC:2.4.1.135]
107534528  CHST10; carbohydrate sulfotransferase 10 isoform X1 [KO:K09674] [EC:2.8.2.-]
107542762  FUT9; alpha-(1,3)-fucosyltransferase 9 [KO:K03663] [EC:2.4.1.152]
107532357  FUT4; alpha-(1,3)-fucosyltransferase 4 [KO:K07632] [EC:2.4.1.-]
107536590  MGAT5B; alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [KO:K09661] [EC:2.4.1.-]
107524271  POMGNT2; protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [KO:K18207] [EC:2.4.1.312]
107527201  B3GALNT2; UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 [KO:K09654] [EC:2.4.1.313]
107523904  POMK; protein O-mannose kinase isoform X1 [KO:K17547] [EC:2.7.1.183]
107541632  ISPD; isoprenoid synthase domain-containing protein [KO:K21031] [EC:2.7.7.40]
107546561  FKTN; fukutin isoform X1 [KO:K19872] [EC:2.7.8.-]
107536720  FKRP; fukutin-related protein [KO:K19873] [EC:2.7.8.-]
107527142  TMEM5; transmembrane protein 5 [KO:K21052] [EC:2.4.2.61]
107533565  B4GAT1; beta-1,4-glucuronyltransferase 1 [KO:K21032] [EC:2.4.1.-]
107530329  GYLTL1B; glycosyltransferase-like protein LARGE2 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
107544967  LARGE; glycosyltransferase-like protein LARGE1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026   
G13027   
G13028   
G13082   
G13083   
G13084  O-Mannose core M1
G13085   
G13086  O-Mannose core M2
G13087   
G13088   
G13089   
G13090   
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093   
G13094   
G13095   
G13096   
G13097   
G13098   
G13099   
G13100   
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
mna00510  N-Glycan biosynthesis
KO pathway
ko00515   
LinkDB

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