KEGG   PATHWAY: mqu00020
Entry
mqu00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Macrosteles quadrilineatus (aster leafhopper)
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mqu00020  Citrate cycle (TCA cycle)
mqu00020

Module
mqu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mqu00020]
mqu_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mqu00020]
mqu_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mqu00020]
mqu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mqu00020]
mqu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mqu00020]
Other DBs
GO: 0006099
Organism
Macrosteles quadrilineatus (aster leafhopper) [GN:mqu]
Gene
128991714  probable citrate synthase 2, mitochondrial [KO:K01647] [EC:2.3.3.1]
128987588  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
128999566  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
128999661  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
128993387  isocitrate dehydrogenase [NADP], mitochondrial-like [KO:K00031] [EC:1.1.1.42]
128988331  isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
129002810  probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [KO:K00030] [EC:1.1.1.41]
128984665  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like isoform X1 [KO:K00030] [EC:1.1.1.41]
128997981  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like isoform X1 [KO:K00030] [EC:1.1.1.41]
128992102  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like [KO:K00030] [EC:1.1.1.41]
128983384  isocitrate dehydrogenase [NAD] subunit beta, mitochondrial [KO:K00030] [EC:1.1.1.41]
128988117  2-oxoglutarate dehydrogenase complex component E1 isoform X1 [KO:K00164] [EC:1.2.4.2]
128985970  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [KO:K00658] [EC:2.3.1.61]
128993985  dihydrolipoyl dehydrogenase, mitochondrial-like isoform X1 [KO:K00382] [EC:1.8.1.4]
128994263  dihydrolipoyl dehydrogenase, mitochondrial-like isoform X1 [KO:K00382] [EC:1.8.1.4]
128982204  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial-like [KO:K01899] [EC:6.2.1.4 6.2.1.5]
128983685  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
128998186  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
128992155  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
128988372  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like [KO:K00234] [EC:1.3.5.1]
128990515  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like [KO:K00234] [EC:1.3.5.1]
128991834  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [KO:K00235] [EC:1.3.5.1]
128991853  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like [KO:K00235] [EC:1.3.5.1]
128993528  succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [KO:K00236]
128983022  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237]
128986005  fumarate hydratase, mitochondrial-like [KO:K01679] [EC:4.2.1.2]
128987360  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
128987700  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
128998346  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
128998390  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
128986041  pyruvate carboxylase, mitochondrial isoform X1 [KO:K01958] [EC:6.4.1.1]
128996019  phosphoenolpyruvate carboxykinase [GTP]-like isoform X1 [KO:K01596] [EC:4.1.1.32]
129004066  probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
129005299  probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
128983432  probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
128983451  probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
128997875  pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [KO:K00162] [EC:1.2.4.1]
129001195  pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [KO:K00162] [EC:1.2.4.1]
128986225  pyruvate dehydrogenase protein X component, mitochondrial-like [KO:K00627] [EC:2.3.1.12]
128990664  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like isoform X1 [KO:K00627] [EC:2.3.1.12]
128990668  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like isoform X1 [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mqu00010  Glycolysis / Gluconeogenesis
mqu00053  Ascorbate and aldarate metabolism
mqu00061  Fatty acid biosynthesis
mqu00062  Fatty acid elongation
mqu00071  Fatty acid degradation
mqu00190  Oxidative phosphorylation
mqu00220  Arginine biosynthesis
mqu00250  Alanine, aspartate and glutamate metabolism
mqu00280  Valine, leucine and isoleucine degradation
mqu00350  Tyrosine metabolism
mqu00470  D-Amino acid metabolism
mqu00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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